Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00934 and ECD_00935 are separated by 168 nucleotides ECD_00935 and ECD_00936 are separated by 265 nucleotides
ECD_00934: ECD_00934 - asparaginyl tRNA synthetase, at 992,674 to 994,074
_00934
ECD_00935: ECD_00935 - nicotinate phosphoribosyltransferase, at 994,243 to 995,445
_00935
ECD_00936: ECD_00936 - aminopeptidase N, at 995,711 to 998,323
_00936
Position (kb)
994
995
996 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 994.136 kb on - strand at 994.140 kb on - strand at 994.241 kb on + strand at 994.378 kb on - strand, within ECD_00935 at 994.400 kb on - strand, within ECD_00935 at 994.445 kb on - strand, within ECD_00935 at 994.663 kb on - strand, within ECD_00935 at 995.048 kb on - strand, within ECD_00935 at 995.191 kb on - strand, within ECD_00935 at 995.196 kb on - strand, within ECD_00935 at 995.206 kb on - strand, within ECD_00935 at 995.287 kb on - strand, within ECD_00935 at 995.355 kb on - strand at 995.355 kb on - strand at 995.357 kb on + strand at 995.358 kb on - strand at 995.382 kb on + strand at 995.383 kb on - strand at 995.392 kb on - strand at 995.394 kb on - strand at 995.394 kb on - strand at 995.445 kb on + strand at 995.445 kb on + strand at 995.468 kb on - strand at 995.512 kb on + strand at 995.512 kb on + strand at 995.515 kb on - strand at 995.588 kb on - strand at 995.588 kb on - strand at 995.687 kb on + strand at 995.699 kb on + strand at 995.905 kb on + strand at 996.094 kb on + strand, within ECD_00936 at 996.094 kb on + strand, within ECD_00936 at 996.101 kb on + strand, within ECD_00936 at 996.164 kb on + strand, within ECD_00936
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 994,136 - +0.5 994,140 - +0.8 994,241 + +2.3 994,378 - ECD_00935 0.11 -0.0 994,400 - ECD_00935 0.13 -1.8 994,445 - ECD_00935 0.17 -1.3 994,663 - ECD_00935 0.35 -2.3 995,048 - ECD_00935 0.67 -1.9 995,191 - ECD_00935 0.79 -0.1 995,196 - ECD_00935 0.79 -1.5 995,206 - ECD_00935 0.80 -1.7 995,287 - ECD_00935 0.87 +0.2 995,355 - -3.1 995,355 - -0.8 995,357 + -1.6 995,358 - -2.1 995,382 + +1.5 995,383 - -1.7 995,392 - +0.4 995,394 - -1.8 995,394 - -1.1 995,445 + +1.6 995,445 + +1.6 995,468 - -0.4 995,512 + -1.7 995,512 + +2.0 995,515 - -1.8 995,588 - -1.6 995,588 - -0.5 995,687 + +0.1 995,699 + +1.4 995,905 + -0.9 996,094 + ECD_00936 0.15 -1.5 996,094 + ECD_00936 0.15 +1.0 996,101 + ECD_00936 0.15 -0.2 996,164 + ECD_00936 0.17 -0.0
Or see this region's nucleotide sequence