Strain Fitness in Escherichia coli BL21 around ECD_03573

Experiment: Tailocin 255

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03572 and ECD_03573 are separated by 100 nucleotidesECD_03573 and ECD_03574 overlap by 4 nucleotides ECD_03572: ECD_03572 - DUF3748 family protein, at 3,756,858 to 3,758,072 _03572 ECD_03573: ECD_03573 - colicin M resistance protein; FAD-binding protein, putative oxidoreductase, at 3,758,173 to 3,759,237 _03573 ECD_03574: ECD_03574 - D-galactonate transporter, at 3,759,234 to 3,760,526 _03574 Position (kb) 3758 3759 3760Strain fitness (log2 ratio) -1 0 1 2 3at 3757.225 kb on - strand, within ECD_03572at 3757.360 kb on - strand, within ECD_03572at 3757.360 kb on - strand, within ECD_03572at 3757.456 kb on + strand, within ECD_03572at 3757.456 kb on + strand, within ECD_03572at 3757.457 kb on - strand, within ECD_03572at 3757.457 kb on - strand, within ECD_03572at 3757.457 kb on - strand, within ECD_03572at 3757.506 kb on - strand, within ECD_03572at 3757.537 kb on + strand, within ECD_03572at 3757.538 kb on - strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.643 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.646 kb on - strand, within ECD_03572at 3757.646 kb on - strand, within ECD_03572at 3757.649 kb on + strand, within ECD_03572at 3757.650 kb on - strand, within ECD_03572at 3757.719 kb on - strand, within ECD_03572at 3757.846 kb on + strand, within ECD_03572at 3757.846 kb on + strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.906 kb on + strand, within ECD_03572at 3757.906 kb on + strand, within ECD_03572at 3757.906 kb on + strand, within ECD_03572at 3757.906 kb on + strand, within ECD_03572at 3757.907 kb on - strand, within ECD_03572at 3757.910 kb on + strand, within ECD_03572at 3757.911 kb on - strand, within ECD_03572at 3757.935 kb on - strand, within ECD_03572at 3757.992 kb on + strandat 3758.021 kb on + strandat 3758.021 kb on + strandat 3758.022 kb on - strandat 3758.027 kb on + strandat 3758.061 kb on + strandat 3758.087 kb on - strandat 3758.108 kb on + strandat 3758.108 kb on + strandat 3758.108 kb on + strandat 3758.108 kb on + strandat 3758.109 kb on - strandat 3758.109 kb on - strandat 3758.109 kb on - strandat 3758.137 kb on + strandat 3758.137 kb on + strandat 3758.137 kb on + strandat 3758.138 kb on - strandat 3758.347 kb on - strand, within ECD_03573at 3758.440 kb on - strand, within ECD_03573at 3758.444 kb on - strand, within ECD_03573at 3758.444 kb on - strand, within ECD_03573at 3758.444 kb on - strand, within ECD_03573at 3758.455 kb on + strand, within ECD_03573at 3758.456 kb on - strand, within ECD_03573at 3758.457 kb on + strand, within ECD_03573at 3758.463 kb on + strand, within ECD_03573at 3758.464 kb on - strand, within ECD_03573at 3758.466 kb on + strand, within ECD_03573at 3758.467 kb on - strand, within ECD_03573at 3758.524 kb on + strand, within ECD_03573at 3758.565 kb on + strand, within ECD_03573at 3758.565 kb on + strand, within ECD_03573at 3758.565 kb on + strand, within ECD_03573at 3758.607 kb on + strand, within ECD_03573at 3758.607 kb on + strand, within ECD_03573at 3758.608 kb on - strand, within ECD_03573at 3758.688 kb on + strand, within ECD_03573at 3758.692 kb on + strand, within ECD_03573at 3758.692 kb on + strand, within ECD_03573at 3758.693 kb on - strand, within ECD_03573at 3758.777 kb on - strand, within ECD_03573at 3758.787 kb on + strand, within ECD_03573at 3758.808 kb on + strand, within ECD_03573at 3758.809 kb on - strand, within ECD_03573at 3759.004 kb on - strand, within ECD_03573at 3759.030 kb on + strand, within ECD_03573at 3759.030 kb on + strand, within ECD_03573at 3759.030 kb on + strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.031 kb on - strand, within ECD_03573at 3759.034 kb on + strand, within ECD_03573at 3759.034 kb on + strand, within ECD_03573at 3759.035 kb on - strand, within ECD_03573at 3759.149 kb on + strandat 3759.152 kb on + strandat 3759.153 kb on - strandat 3759.183 kb on - strandat 3759.195 kb on + strandat 3759.196 kb on - strandat 3759.269 kb on + strandat 3759.271 kb on + strandat 3759.272 kb on - strandat 3759.272 kb on - strandat 3759.305 kb on + strandat 3759.305 kb on + strandat 3759.305 kb on + strandat 3759.306 kb on - strandat 3759.307 kb on + strandat 3759.307 kb on + strandat 3759.307 kb on + strandat 3759.307 kb on + strandat 3759.307 kb on + strandat 3759.308 kb on - strandat 3759.308 kb on - strandat 3759.308 kb on - strandat 3759.308 kb on - strandat 3759.308 kb on - strandat 3759.308 kb on - strandat 3759.347 kb on - strandat 3759.458 kb on + strand, within ECD_03574at 3759.506 kb on + strand, within ECD_03574at 3759.506 kb on + strand, within ECD_03574at 3759.506 kb on + strand, within ECD_03574at 3759.506 kb on + strand, within ECD_03574at 3759.506 kb on + strand, within ECD_03574at 3759.507 kb on - strand, within ECD_03574at 3759.507 kb on - strand, within ECD_03574at 3759.507 kb on - strand, within ECD_03574at 3759.507 kb on - strand, within ECD_03574at 3759.529 kb on + strand, within ECD_03574at 3759.529 kb on + strand, within ECD_03574at 3759.530 kb on - strand, within ECD_03574at 3759.530 kb on - strand, within ECD_03574at 3759.530 kb on - strand, within ECD_03574at 3759.572 kb on + strand, within ECD_03574at 3759.611 kb on + strand, within ECD_03574at 3759.611 kb on + strand, within ECD_03574at 3759.611 kb on + strand, within ECD_03574at 3759.615 kb on + strand, within ECD_03574at 3759.615 kb on + strand, within ECD_03574at 3759.687 kb on - strand, within ECD_03574at 3759.726 kb on + strand, within ECD_03574at 3759.726 kb on + strand, within ECD_03574at 3759.727 kb on - strand, within ECD_03574at 3759.764 kb on + strand, within ECD_03574at 3759.765 kb on - strand, within ECD_03574at 3759.765 kb on - strand, within ECD_03574at 3759.765 kb on - strand, within ECD_03574at 3759.790 kb on + strand, within ECD_03574at 3759.907 kb on + strand, within ECD_03574at 3759.907 kb on + strand, within ECD_03574at 3759.908 kb on - strand, within ECD_03574at 3759.908 kb on - strand, within ECD_03574at 3759.929 kb on + strand, within ECD_03574at 3760.092 kb on - strand, within ECD_03574at 3760.092 kb on - strand, within ECD_03574at 3760.092 kb on - strand, within ECD_03574at 3760.206 kb on + strand, within ECD_03574at 3760.206 kb on + strand, within ECD_03574at 3760.206 kb on + strand, within ECD_03574at 3760.207 kb on - strand, within ECD_03574at 3760.215 kb on + strand, within ECD_03574at 3760.216 kb on - strand, within ECD_03574

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 255
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3,757,225 - ECD_03572 0.30 -0.9
3,757,360 - ECD_03572 0.41 -1.1
3,757,360 - ECD_03572 0.41 -0.5
3,757,456 + ECD_03572 0.49 -1.5
3,757,456 + ECD_03572 0.49 +0.4
3,757,457 - ECD_03572 0.49 -0.6
3,757,457 - ECD_03572 0.49 +0.2
3,757,457 - ECD_03572 0.49 -0.3
3,757,506 - ECD_03572 0.53 -0.3
3,757,537 + ECD_03572 0.56 +0.3
3,757,538 - ECD_03572 0.56 +0.2
3,757,560 + ECD_03572 0.58 +0.3
3,757,560 + ECD_03572 0.58 -1.1
3,757,560 + ECD_03572 0.58 -0.7
3,757,560 + ECD_03572 0.58 -0.1
3,757,632 + ECD_03572 0.64 +0.1
3,757,632 + ECD_03572 0.64 -0.4
3,757,632 + ECD_03572 0.64 -0.4
3,757,632 + ECD_03572 0.64 +0.1
3,757,632 + ECD_03572 0.64 -0.6
3,757,632 + ECD_03572 0.64 +1.7
3,757,632 + ECD_03572 0.64 -0.0
3,757,633 - ECD_03572 0.64 -0.3
3,757,633 - ECD_03572 0.64 +0.5
3,757,633 - ECD_03572 0.64 -0.6
3,757,633 - ECD_03572 0.64 -0.2
3,757,633 - ECD_03572 0.64 -0.5
3,757,633 - ECD_03572 0.64 +0.4
3,757,633 - ECD_03572 0.64 -0.2
3,757,633 - ECD_03572 0.64 +0.4
3,757,633 - ECD_03572 0.64 +0.2
3,757,633 - ECD_03572 0.64 -0.3
3,757,633 - ECD_03572 0.64 +0.5
3,757,643 + ECD_03572 0.65 -0.3
3,757,645 + ECD_03572 0.65 -0.8
3,757,645 + ECD_03572 0.65 +0.4
3,757,645 + ECD_03572 0.65 +0.3
3,757,645 + ECD_03572 0.65 +0.3
3,757,645 + ECD_03572 0.65 +0.3
3,757,646 - ECD_03572 0.65 +0.5
3,757,646 - ECD_03572 0.65 +0.1
3,757,649 + ECD_03572 0.65 +0.3
3,757,650 - ECD_03572 0.65 +0.1
3,757,719 - ECD_03572 0.71 +0.0
3,757,846 + ECD_03572 0.81 +0.8
3,757,846 + ECD_03572 0.81 +0.9
3,757,847 - ECD_03572 0.81 -0.2
3,757,847 - ECD_03572 0.81 -0.2
3,757,847 - ECD_03572 0.81 -0.3
3,757,847 - ECD_03572 0.81 -0.0
3,757,906 + ECD_03572 0.86 -1.6
3,757,906 + ECD_03572 0.86 +0.6
3,757,906 + ECD_03572 0.86 +0.5
3,757,906 + ECD_03572 0.86 -1.2
3,757,907 - ECD_03572 0.86 -0.2
3,757,910 + ECD_03572 0.87 +0.4
3,757,911 - ECD_03572 0.87 +3.5
3,757,935 - ECD_03572 0.89 +0.0
3,757,992 + -0.4
3,758,021 + -0.0
3,758,021 + +0.4
3,758,022 - +0.2
3,758,027 + -0.4
3,758,061 + -0.5
3,758,087 - +0.3
3,758,108 + -0.5
3,758,108 + +0.9
3,758,108 + -0.7
3,758,108 + +0.3
3,758,109 - +0.5
3,758,109 - +0.3
3,758,109 - +0.4
3,758,137 + +0.0
3,758,137 + -0.2
3,758,137 + -0.3
3,758,138 - -0.2
3,758,347 - ECD_03573 0.16 +0.1
3,758,440 - ECD_03573 0.25 -1.0
3,758,444 - ECD_03573 0.25 +0.4
3,758,444 - ECD_03573 0.25 -0.1
3,758,444 - ECD_03573 0.25 +0.4
3,758,455 + ECD_03573 0.26 -0.2
3,758,456 - ECD_03573 0.27 -0.6
3,758,457 + ECD_03573 0.27 +0.4
3,758,463 + ECD_03573 0.27 +0.3
3,758,464 - ECD_03573 0.27 -0.4
3,758,466 + ECD_03573 0.28 -0.5
3,758,467 - ECD_03573 0.28 +0.5
3,758,524 + ECD_03573 0.33 -0.0
3,758,565 + ECD_03573 0.37 -0.6
3,758,565 + ECD_03573 0.37 -0.0
3,758,565 + ECD_03573 0.37 +0.8
3,758,607 + ECD_03573 0.41 -0.2
3,758,607 + ECD_03573 0.41 +0.1
3,758,608 - ECD_03573 0.41 -0.4
3,758,688 + ECD_03573 0.48 -0.1
3,758,692 + ECD_03573 0.49 -0.2
3,758,692 + ECD_03573 0.49 -0.5
3,758,693 - ECD_03573 0.49 +0.0
3,758,777 - ECD_03573 0.57 +0.1
3,758,787 + ECD_03573 0.58 -0.3
3,758,808 + ECD_03573 0.60 +0.4
3,758,809 - ECD_03573 0.60 +0.1
3,759,004 - ECD_03573 0.78 -0.2
3,759,030 + ECD_03573 0.80 +0.9
3,759,030 + ECD_03573 0.80 -0.5
3,759,030 + ECD_03573 0.80 +0.0
3,759,031 - ECD_03573 0.81 -0.0
3,759,031 - ECD_03573 0.81 -0.7
3,759,031 - ECD_03573 0.81 -0.2
3,759,031 - ECD_03573 0.81 -0.0
3,759,031 - ECD_03573 0.81 +0.1
3,759,031 - ECD_03573 0.81 +1.1
3,759,031 - ECD_03573 0.81 +0.0
3,759,031 - ECD_03573 0.81 +1.0
3,759,034 + ECD_03573 0.81 -0.7
3,759,034 + ECD_03573 0.81 +0.1
3,759,035 - ECD_03573 0.81 -0.5
3,759,149 + -0.2
3,759,152 + +0.1
3,759,153 - -0.3
3,759,183 - +0.3
3,759,195 + +0.4
3,759,196 - -0.8
3,759,269 + +0.2
3,759,271 + +0.9
3,759,272 - -1.2
3,759,272 - +0.7
3,759,305 + -0.4
3,759,305 + -0.3
3,759,305 + -0.7
3,759,306 - +1.0
3,759,307 + +0.6
3,759,307 + +1.4
3,759,307 + -0.3
3,759,307 + -0.9
3,759,307 + -0.2
3,759,308 - -0.6
3,759,308 - -0.5
3,759,308 - +0.0
3,759,308 - -0.3
3,759,308 - -0.2
3,759,308 - -0.5
3,759,347 - -0.7
3,759,458 + ECD_03574 0.17 +0.3
3,759,506 + ECD_03574 0.21 +1.2
3,759,506 + ECD_03574 0.21 +0.4
3,759,506 + ECD_03574 0.21 -0.0
3,759,506 + ECD_03574 0.21 +0.6
3,759,506 + ECD_03574 0.21 -0.4
3,759,507 - ECD_03574 0.21 -0.0
3,759,507 - ECD_03574 0.21 -0.1
3,759,507 - ECD_03574 0.21 -0.9
3,759,507 - ECD_03574 0.21 +0.6
3,759,529 + ECD_03574 0.23 +0.1
3,759,529 + ECD_03574 0.23 -0.1
3,759,530 - ECD_03574 0.23 -0.1
3,759,530 - ECD_03574 0.23 +1.0
3,759,530 - ECD_03574 0.23 +0.4
3,759,572 + ECD_03574 0.26 +0.5
3,759,611 + ECD_03574 0.29 +0.5
3,759,611 + ECD_03574 0.29 -0.5
3,759,611 + ECD_03574 0.29 +0.0
3,759,615 + ECD_03574 0.29 -0.5
3,759,615 + ECD_03574 0.29 -0.3
3,759,687 - ECD_03574 0.35 +0.7
3,759,726 + ECD_03574 0.38 -0.2
3,759,726 + ECD_03574 0.38 +0.1
3,759,727 - ECD_03574 0.38 +0.1
3,759,764 + ECD_03574 0.41 +0.1
3,759,765 - ECD_03574 0.41 +0.2
3,759,765 - ECD_03574 0.41 +0.7
3,759,765 - ECD_03574 0.41 +0.2
3,759,790 + ECD_03574 0.43 +1.3
3,759,907 + ECD_03574 0.52 -0.2
3,759,907 + ECD_03574 0.52 +0.5
3,759,908 - ECD_03574 0.52 +0.4
3,759,908 - ECD_03574 0.52 +0.0
3,759,929 + ECD_03574 0.54 +0.1
3,760,092 - ECD_03574 0.66 -0.1
3,760,092 - ECD_03574 0.66 +0.1
3,760,092 - ECD_03574 0.66 -0.2
3,760,206 + ECD_03574 0.75 +0.5
3,760,206 + ECD_03574 0.75 +0.7
3,760,206 + ECD_03574 0.75 -0.1
3,760,207 - ECD_03574 0.75 -0.3
3,760,215 + ECD_03574 0.76 -0.6
3,760,216 - ECD_03574 0.76 -0.1

Or see this region's nucleotide sequence