Experiment: Tailocin 255
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03613 and ECD_03614 are separated by 161 nucleotides ECD_03614 and ECD_03615 are separated by 352 nucleotides ECD_03615 and ECD_03616 are separated by 20 nucleotides
ECD_03613: ECD_03613 - L-glutamine:D-fructose-6-phosphate aminotransferase, at 3,800,640 to 3,802,469
_03613
ECD_03614: ECD_03614 - fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase, at 3,802,631 to 3,804,001
_03614
ECD_03615: ECD_03615 - F1 sector of membrane-bound ATP synthase, epsilon subunit, at 3,804,354 to 3,804,773
_03615
ECD_03616: ECD_03616 - F1 sector of membrane-bound ATP synthase, beta subunit, at 3,804,794 to 3,806,176
_03616
Position (kb)
3802
3803
3804
3805 Strain fitness (log2 ratio)
-1
0
1 at 3802.555 kb on - strand at 3802.563 kb on - strand at 3802.563 kb on - strand at 3802.563 kb on - strand at 3802.563 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.567 kb on - strand at 3802.587 kb on + strand at 3802.587 kb on + strand at 3802.588 kb on - strand at 3802.588 kb on - strand at 3802.588 kb on - strand at 3804.177 kb on + strand at 3804.188 kb on - strand at 3804.230 kb on + strand at 3804.253 kb on + strand at 3804.254 kb on - strand at 3804.268 kb on + strand at 3804.268 kb on + strand at 3804.269 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 255 remove 3,802,555 - +0.1 3,802,563 - -0.1 3,802,563 - -0.8 3,802,563 - -0.3 3,802,563 - -0.3 3,802,567 - -0.4 3,802,567 - -0.2 3,802,567 - +0.4 3,802,567 - +0.3 3,802,567 - -0.4 3,802,587 + -0.2 3,802,587 + -0.5 3,802,588 - -0.4 3,802,588 - +0.2 3,802,588 - -0.4 3,804,177 + +0.6 3,804,188 - -0.4 3,804,230 + -0.1 3,804,253 + -0.2 3,804,254 - -1.6 3,804,268 + -0.0 3,804,268 + -0.2 3,804,269 - +0.4
Or see this region's nucleotide sequence