Strain Fitness in Escherichia coli BL21 around ECD_02681

Experiment: Tailocin 255

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02679 and ECD_02680 are separated by 68 nucleotidesECD_02680 and ECD_02681 are separated by 137 nucleotidesECD_02681 and ECD_02682 are separated by 107 nucleotides ECD_02679: ECD_02679 - methyl-directed mismatch repair protein, at 2,807,943 to 2,808,632 _02679 ECD_02680: ECD_02680 - UPF0053 family inner membrane protein, at 2,808,701 to 2,809,414 _02680 ECD_02681: ECD_02681 - DUF903 family verified lipoprotein, at 2,809,552 to 2,809,770 _02681 ECD_02682: ECD_02682 - putative NADP(H)-dependent aldo-keto reductase, at 2,809,878 to 2,810,918 _02682 Position (kb) 2809 2810Strain fitness (log2 ratio) -1 0 1 2at 2808.577 kb on - strandat 2808.577 kb on - strandat 2808.604 kb on + strandat 2808.605 kb on - strandat 2808.664 kb on - strandat 2808.664 kb on - strandat 2808.665 kb on + strandat 2808.666 kb on - strandat 2808.666 kb on - strandat 2808.666 kb on - strandat 2808.666 kb on - strandat 2808.666 kb on - strandat 2808.666 kb on - strandat 2808.666 kb on - strandat 2808.669 kb on + strandat 2808.698 kb on + strandat 2808.698 kb on + strandat 2808.698 kb on + strandat 2808.698 kb on + strandat 2808.699 kb on - strandat 2808.705 kb on + strandat 2808.705 kb on + strandat 2808.705 kb on + strandat 2808.705 kb on + strandat 2808.791 kb on - strand, within ECD_02680at 2808.791 kb on - strand, within ECD_02680at 2808.911 kb on - strand, within ECD_02680at 2808.934 kb on + strand, within ECD_02680at 2809.096 kb on + strand, within ECD_02680at 2809.096 kb on + strand, within ECD_02680at 2809.097 kb on - strand, within ECD_02680at 2809.108 kb on + strand, within ECD_02680at 2809.108 kb on + strand, within ECD_02680at 2809.111 kb on + strand, within ECD_02680at 2809.112 kb on - strand, within ECD_02680at 2809.165 kb on + strand, within ECD_02680at 2809.166 kb on - strand, within ECD_02680at 2809.166 kb on - strand, within ECD_02680at 2809.166 kb on - strand, within ECD_02680at 2809.168 kb on + strand, within ECD_02680at 2809.168 kb on + strand, within ECD_02680at 2809.168 kb on + strand, within ECD_02680at 2809.168 kb on + strand, within ECD_02680at 2809.169 kb on - strand, within ECD_02680at 2809.326 kb on + strand, within ECD_02680at 2809.337 kb on + strand, within ECD_02680at 2809.337 kb on + strand, within ECD_02680at 2809.337 kb on + strand, within ECD_02680at 2809.337 kb on + strand, within ECD_02680at 2809.337 kb on + strand, within ECD_02680at 2809.343 kb on + strandat 2809.343 kb on + strandat 2809.343 kb on + strandat 2809.344 kb on - strandat 2809.344 kb on - strandat 2809.344 kb on - strandat 2809.344 kb on - strandat 2809.344 kb on - strandat 2809.416 kb on - strandat 2809.445 kb on - strandat 2809.458 kb on - strandat 2809.492 kb on + strandat 2809.493 kb on - strandat 2809.493 kb on - strandat 2809.493 kb on - strandat 2809.493 kb on - strandat 2809.494 kb on + strandat 2809.494 kb on + strandat 2809.494 kb on + strandat 2809.494 kb on + strandat 2809.494 kb on + strandat 2809.495 kb on - strandat 2809.495 kb on - strandat 2809.495 kb on - strandat 2809.495 kb on - strandat 2809.495 kb on - strandat 2809.495 kb on - strandat 2809.496 kb on + strandat 2809.496 kb on + strandat 2809.496 kb on + strandat 2809.497 kb on - strandat 2809.497 kb on - strandat 2809.497 kb on - strandat 2809.497 kb on - strandat 2809.497 kb on - strandat 2809.518 kb on + strandat 2809.518 kb on + strandat 2809.518 kb on + strandat 2809.519 kb on - strandat 2809.519 kb on - strandat 2809.526 kb on + strandat 2809.526 kb on + strandat 2809.526 kb on + strandat 2809.621 kb on + strand, within ECD_02681at 2809.621 kb on + strand, within ECD_02681at 2809.621 kb on + strand, within ECD_02681at 2809.622 kb on - strand, within ECD_02681at 2809.719 kb on + strand, within ECD_02681at 2809.775 kb on + strandat 2809.775 kb on + strandat 2809.775 kb on + strandat 2809.842 kb on + strandat 2809.842 kb on + strandat 2809.842 kb on + strandat 2809.849 kb on + strandat 2809.849 kb on + strandat 2809.849 kb on + strandat 2809.849 kb on + strandat 2809.849 kb on + strandat 2809.850 kb on - strandat 2809.850 kb on - strandat 2809.884 kb on + strandat 2809.884 kb on + strandat 2809.892 kb on + strandat 2809.892 kb on + strandat 2809.892 kb on + strandat 2809.892 kb on + strandat 2809.892 kb on + strandat 2809.989 kb on + strand, within ECD_02682at 2810.009 kb on + strand, within ECD_02682at 2810.034 kb on + strand, within ECD_02682at 2810.079 kb on + strand, within ECD_02682at 2810.079 kb on + strand, within ECD_02682at 2810.080 kb on - strand, within ECD_02682at 2810.127 kb on - strand, within ECD_02682at 2810.159 kb on + strand, within ECD_02682at 2810.250 kb on + strand, within ECD_02682at 2810.250 kb on + strand, within ECD_02682at 2810.250 kb on + strand, within ECD_02682at 2810.250 kb on + strand, within ECD_02682at 2810.251 kb on - strand, within ECD_02682at 2810.315 kb on + strand, within ECD_02682at 2810.315 kb on + strand, within ECD_02682at 2810.315 kb on + strand, within ECD_02682at 2810.315 kb on + strand, within ECD_02682at 2810.315 kb on + strand, within ECD_02682at 2810.316 kb on - strand, within ECD_02682at 2810.316 kb on - strand, within ECD_02682at 2810.316 kb on - strand, within ECD_02682at 2810.316 kb on - strand, within ECD_02682at 2810.376 kb on + strand, within ECD_02682at 2810.377 kb on - strand, within ECD_02682at 2810.377 kb on - strand, within ECD_02682at 2810.400 kb on + strand, within ECD_02682at 2810.400 kb on + strand, within ECD_02682at 2810.403 kb on - strand, within ECD_02682at 2810.434 kb on + strand, within ECD_02682at 2810.434 kb on + strand, within ECD_02682at 2810.434 kb on + strand, within ECD_02682at 2810.477 kb on + strand, within ECD_02682at 2810.499 kb on + strand, within ECD_02682at 2810.499 kb on + strand, within ECD_02682at 2810.499 kb on + strand, within ECD_02682at 2810.500 kb on - strand, within ECD_02682at 2810.500 kb on - strand, within ECD_02682at 2810.500 kb on - strand, within ECD_02682at 2810.509 kb on + strand, within ECD_02682at 2810.527 kb on + strand, within ECD_02682at 2810.527 kb on + strand, within ECD_02682at 2810.528 kb on - strand, within ECD_02682at 2810.610 kb on + strand, within ECD_02682at 2810.642 kb on + strand, within ECD_02682at 2810.642 kb on + strand, within ECD_02682at 2810.642 kb on + strand, within ECD_02682at 2810.643 kb on - strand, within ECD_02682at 2810.645 kb on + strand, within ECD_02682at 2810.645 kb on + strand, within ECD_02682at 2810.645 kb on + strand, within ECD_02682at 2810.645 kb on + strand, within ECD_02682at 2810.645 kb on + strand, within ECD_02682at 2810.646 kb on - strand, within ECD_02682at 2810.654 kb on + strand, within ECD_02682at 2810.670 kb on + strand, within ECD_02682at 2810.671 kb on - strand, within ECD_02682at 2810.706 kb on + strand, within ECD_02682at 2810.706 kb on + strand, within ECD_02682at 2810.707 kb on - strand, within ECD_02682at 2810.707 kb on - strand, within ECD_02682at 2810.707 kb on - strand, within ECD_02682at 2810.764 kb on + strand, within ECD_02682at 2810.764 kb on + strand, within ECD_02682at 2810.764 kb on + strand, within ECD_02682at 2810.765 kb on - strand, within ECD_02682

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 255
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2,808,577 - -1.3
2,808,577 - -0.7
2,808,604 + +0.9
2,808,605 - +1.1
2,808,664 - +0.5
2,808,664 - +0.5
2,808,665 + +0.6
2,808,666 - -0.1
2,808,666 - +1.5
2,808,666 - +0.6
2,808,666 - +0.2
2,808,666 - +0.5
2,808,666 - -0.4
2,808,666 - +0.5
2,808,669 + +0.1
2,808,698 + +0.7
2,808,698 + +0.5
2,808,698 + +0.4
2,808,698 + -0.1
2,808,699 - +0.1
2,808,705 + +0.5
2,808,705 + -0.7
2,808,705 + +0.6
2,808,705 + +0.8
2,808,791 - ECD_02680 0.13 -0.1
2,808,791 - ECD_02680 0.13 +0.7
2,808,911 - ECD_02680 0.29 +0.0
2,808,934 + ECD_02680 0.33 -0.4
2,809,096 + ECD_02680 0.55 +0.6
2,809,096 + ECD_02680 0.55 +0.9
2,809,097 - ECD_02680 0.55 +0.2
2,809,108 + ECD_02680 0.57 +1.0
2,809,108 + ECD_02680 0.57 -0.7
2,809,111 + ECD_02680 0.57 -1.0
2,809,112 - ECD_02680 0.58 +0.1
2,809,165 + ECD_02680 0.65 +0.1
2,809,166 - ECD_02680 0.65 +0.9
2,809,166 - ECD_02680 0.65 -0.0
2,809,166 - ECD_02680 0.65 +0.6
2,809,168 + ECD_02680 0.65 -0.2
2,809,168 + ECD_02680 0.65 +0.3
2,809,168 + ECD_02680 0.65 -0.0
2,809,168 + ECD_02680 0.65 -0.2
2,809,169 - ECD_02680 0.66 +1.9
2,809,326 + ECD_02680 0.88 +0.4
2,809,337 + ECD_02680 0.89 -0.0
2,809,337 + ECD_02680 0.89 +0.5
2,809,337 + ECD_02680 0.89 +0.8
2,809,337 + ECD_02680 0.89 +0.3
2,809,337 + ECD_02680 0.89 +0.6
2,809,343 + +0.5
2,809,343 + -0.5
2,809,343 + +0.1
2,809,344 - -0.6
2,809,344 - -1.1
2,809,344 - +0.8
2,809,344 - -0.0
2,809,344 - +1.2
2,809,416 - +0.2
2,809,445 - +0.3
2,809,458 - -0.4
2,809,492 + -0.1
2,809,493 - -0.2
2,809,493 - -0.9
2,809,493 - -1.4
2,809,493 - +0.5
2,809,494 + +0.1
2,809,494 + -0.2
2,809,494 + -0.3
2,809,494 + +0.0
2,809,494 + -0.6
2,809,495 - +0.8
2,809,495 - -0.6
2,809,495 - +0.0
2,809,495 - +0.4
2,809,495 - -0.2
2,809,495 - -0.8
2,809,496 + -0.5
2,809,496 + +0.1
2,809,496 + -0.4
2,809,497 - -0.8
2,809,497 - +0.3
2,809,497 - -0.1
2,809,497 - +0.1
2,809,497 - +0.2
2,809,518 + -0.0
2,809,518 + +0.4
2,809,518 + +0.0
2,809,519 - -0.9
2,809,519 - +0.4
2,809,526 + -0.4
2,809,526 + -0.6
2,809,526 + -0.7
2,809,621 + ECD_02681 0.32 -0.1
2,809,621 + ECD_02681 0.32 -0.1
2,809,621 + ECD_02681 0.32 -0.6
2,809,622 - ECD_02681 0.32 -0.6
2,809,719 + ECD_02681 0.76 -0.7
2,809,775 + -0.9
2,809,775 + +0.4
2,809,775 + -0.2
2,809,842 + -0.9
2,809,842 + -0.2
2,809,842 + -0.3
2,809,849 + -0.4
2,809,849 + +0.3
2,809,849 + +0.1
2,809,849 + +0.4
2,809,849 + +0.6
2,809,850 - -0.2
2,809,850 - -0.1
2,809,884 + +0.7
2,809,884 + +0.5
2,809,892 + +1.2
2,809,892 + +0.0
2,809,892 + +1.0
2,809,892 + -0.0
2,809,892 + +0.2
2,809,989 + ECD_02682 0.11 +0.4
2,810,009 + ECD_02682 0.13 +0.8
2,810,034 + ECD_02682 0.15 +0.7
2,810,079 + ECD_02682 0.19 -0.5
2,810,079 + ECD_02682 0.19 +0.2
2,810,080 - ECD_02682 0.19 -0.7
2,810,127 - ECD_02682 0.24 -0.3
2,810,159 + ECD_02682 0.27 -0.9
2,810,250 + ECD_02682 0.36 -0.9
2,810,250 + ECD_02682 0.36 -0.6
2,810,250 + ECD_02682 0.36 +0.1
2,810,250 + ECD_02682 0.36 +0.1
2,810,251 - ECD_02682 0.36 -0.1
2,810,315 + ECD_02682 0.42 +0.6
2,810,315 + ECD_02682 0.42 -0.2
2,810,315 + ECD_02682 0.42 -0.1
2,810,315 + ECD_02682 0.42 -0.0
2,810,315 + ECD_02682 0.42 +0.2
2,810,316 - ECD_02682 0.42 -0.1
2,810,316 - ECD_02682 0.42 +0.3
2,810,316 - ECD_02682 0.42 -0.7
2,810,316 - ECD_02682 0.42 +0.5
2,810,376 + ECD_02682 0.48 +0.0
2,810,377 - ECD_02682 0.48 +0.3
2,810,377 - ECD_02682 0.48 +0.4
2,810,400 + ECD_02682 0.50 +0.1
2,810,400 + ECD_02682 0.50 +0.9
2,810,403 - ECD_02682 0.50 -0.3
2,810,434 + ECD_02682 0.53 -0.1
2,810,434 + ECD_02682 0.53 -0.2
2,810,434 + ECD_02682 0.53 +0.4
2,810,477 + ECD_02682 0.58 -0.4
2,810,499 + ECD_02682 0.60 +0.0
2,810,499 + ECD_02682 0.60 +0.3
2,810,499 + ECD_02682 0.60 +1.6
2,810,500 - ECD_02682 0.60 -0.6
2,810,500 - ECD_02682 0.60 -0.9
2,810,500 - ECD_02682 0.60 +0.9
2,810,509 + ECD_02682 0.61 +1.4
2,810,527 + ECD_02682 0.62 +0.4
2,810,527 + ECD_02682 0.62 +0.8
2,810,528 - ECD_02682 0.62 -0.1
2,810,610 + ECD_02682 0.70 +0.5
2,810,642 + ECD_02682 0.73 -0.4
2,810,642 + ECD_02682 0.73 -0.3
2,810,642 + ECD_02682 0.73 -0.6
2,810,643 - ECD_02682 0.73 +1.5
2,810,645 + ECD_02682 0.74 -0.7
2,810,645 + ECD_02682 0.74 -0.3
2,810,645 + ECD_02682 0.74 -0.3
2,810,645 + ECD_02682 0.74 -0.1
2,810,645 + ECD_02682 0.74 +0.2
2,810,646 - ECD_02682 0.74 +0.8
2,810,654 + ECD_02682 0.75 -0.4
2,810,670 + ECD_02682 0.76 +0.3
2,810,671 - ECD_02682 0.76 +0.4
2,810,706 + ECD_02682 0.80 +0.4
2,810,706 + ECD_02682 0.80 +0.6
2,810,707 - ECD_02682 0.80 -0.5
2,810,707 - ECD_02682 0.80 +0.3
2,810,707 - ECD_02682 0.80 -0.0
2,810,764 + ECD_02682 0.85 +1.4
2,810,764 + ECD_02682 0.85 -0.8
2,810,764 + ECD_02682 0.85 -0.5
2,810,765 - ECD_02682 0.85 -0.7

Or see this region's nucleotide sequence