Experiment: Tailocin 255
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02357 and ECD_02358 are separated by 125 nucleotides ECD_02358 and ECD_02359 are separated by 67 nucleotides ECD_02359 and ECD_02360 are separated by 205 nucleotides
ECD_02357: ECD_02357 - DUF1176 family protein, at 2,446,223 to 2,447,266
_02357
ECD_02358: ECD_02358 - GDP-mannose pyrophosphatase, at 2,447,392 to 2,447,967
_02358
ECD_02359: ECD_02359 - putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit, at 2,448,035 to 2,450,014
_02359
ECD_02360: ECD_02360 - sensory histidine kinase in two-component regulatory system with NarP, at 2,450,220 to 2,451,920
_02360
Position (kb)
2448
2449
2450
2451 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2447.060 kb on - strand, within ECD_02357 at 2447.063 kb on + strand, within ECD_02357 at 2447.119 kb on + strand, within ECD_02357 at 2447.120 kb on - strand, within ECD_02357 at 2447.120 kb on - strand, within ECD_02357 at 2447.161 kb on + strand, within ECD_02357 at 2447.161 kb on + strand, within ECD_02357 at 2447.162 kb on - strand at 2447.378 kb on - strand at 2447.562 kb on - strand, within ECD_02358 at 2447.610 kb on + strand, within ECD_02358 at 2447.611 kb on - strand, within ECD_02358 at 2447.612 kb on + strand, within ECD_02358 at 2447.613 kb on - strand, within ECD_02358 at 2447.613 kb on - strand, within ECD_02358 at 2447.613 kb on - strand, within ECD_02358 at 2447.613 kb on - strand, within ECD_02358 at 2447.810 kb on + strand, within ECD_02358 at 2447.844 kb on - strand, within ECD_02358 at 2447.856 kb on + strand, within ECD_02358 at 2447.898 kb on + strand, within ECD_02358 at 2447.898 kb on + strand, within ECD_02358 at 2447.899 kb on - strand, within ECD_02358 at 2447.899 kb on - strand, within ECD_02358 at 2447.899 kb on - strand, within ECD_02358 at 2447.899 kb on - strand, within ECD_02358 at 2447.899 kb on - strand, within ECD_02358 at 2447.918 kb on + strand at 2447.997 kb on - strand at 2448.033 kb on + strand at 2448.596 kb on + strand, within ECD_02359 at 2448.699 kb on + strand, within ECD_02359 at 2448.699 kb on + strand, within ECD_02359 at 2448.747 kb on + strand, within ECD_02359 at 2448.748 kb on - strand, within ECD_02359 at 2448.748 kb on - strand, within ECD_02359 at 2448.777 kb on + strand, within ECD_02359 at 2448.778 kb on - strand, within ECD_02359 at 2448.778 kb on - strand, within ECD_02359 at 2448.948 kb on + strand, within ECD_02359 at 2449.098 kb on + strand, within ECD_02359 at 2449.117 kb on + strand, within ECD_02359 at 2449.147 kb on + strand, within ECD_02359 at 2449.148 kb on - strand, within ECD_02359 at 2449.148 kb on - strand, within ECD_02359 at 2449.278 kb on - strand, within ECD_02359 at 2449.278 kb on - strand, within ECD_02359 at 2449.278 kb on - strand, within ECD_02359 at 2449.279 kb on + strand, within ECD_02359 at 2449.279 kb on + strand, within ECD_02359 at 2449.279 kb on + strand, within ECD_02359 at 2449.279 kb on + strand, within ECD_02359 at 2449.330 kb on + strand, within ECD_02359 at 2449.331 kb on - strand, within ECD_02359 at 2449.380 kb on + strand, within ECD_02359 at 2449.381 kb on - strand, within ECD_02359 at 2449.745 kb on - strand, within ECD_02359 at 2449.754 kb on - strand, within ECD_02359 at 2449.754 kb on - strand, within ECD_02359 at 2449.754 kb on - strand, within ECD_02359 at 2449.862 kb on - strand at 2449.862 kb on - strand at 2449.889 kb on - strand at 2450.079 kb on - strand at 2450.112 kb on + strand at 2450.113 kb on - strand at 2450.116 kb on + strand at 2450.130 kb on + strand at 2450.194 kb on - strand at 2450.352 kb on - strand at 2450.464 kb on + strand, within ECD_02360 at 2450.487 kb on + strand, within ECD_02360 at 2450.488 kb on - strand, within ECD_02360 at 2450.488 kb on - strand, within ECD_02360 at 2450.592 kb on - strand, within ECD_02360 at 2450.595 kb on - strand, within ECD_02360 at 2450.598 kb on - strand, within ECD_02360 at 2450.602 kb on - strand, within ECD_02360 at 2450.602 kb on - strand, within ECD_02360 at 2450.614 kb on + strand, within ECD_02360 at 2450.889 kb on - strand, within ECD_02360 at 2450.889 kb on - strand, within ECD_02360 at 2450.970 kb on + strand, within ECD_02360 at 2450.971 kb on - strand, within ECD_02360
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 255 remove 2,447,060 - ECD_02357 0.80 -0.1 2,447,063 + ECD_02357 0.80 +0.5 2,447,119 + ECD_02357 0.86 +0.2 2,447,120 - ECD_02357 0.86 +0.3 2,447,120 - ECD_02357 0.86 +0.1 2,447,161 + ECD_02357 0.90 -0.5 2,447,161 + ECD_02357 0.90 -0.9 2,447,162 - +0.2 2,447,378 - -1.4 2,447,562 - ECD_02358 0.30 -2.1 2,447,610 + ECD_02358 0.38 -0.6 2,447,611 - ECD_02358 0.38 -0.2 2,447,612 + ECD_02358 0.38 +1.0 2,447,613 - ECD_02358 0.38 -0.2 2,447,613 - ECD_02358 0.38 +0.8 2,447,613 - ECD_02358 0.38 +0.4 2,447,613 - ECD_02358 0.38 +0.3 2,447,810 + ECD_02358 0.73 -0.7 2,447,844 - ECD_02358 0.78 -1.1 2,447,856 + ECD_02358 0.81 -0.6 2,447,898 + ECD_02358 0.88 +0.0 2,447,898 + ECD_02358 0.88 -1.5 2,447,899 - ECD_02358 0.88 -2.0 2,447,899 - ECD_02358 0.88 -1.0 2,447,899 - ECD_02358 0.88 -0.1 2,447,899 - ECD_02358 0.88 +0.2 2,447,899 - ECD_02358 0.88 -0.7 2,447,918 + +0.2 2,447,997 - -0.8 2,448,033 + +0.4 2,448,596 + ECD_02359 0.28 -0.1 2,448,699 + ECD_02359 0.34 +0.5 2,448,699 + ECD_02359 0.34 +0.7 2,448,747 + ECD_02359 0.36 +0.6 2,448,748 - ECD_02359 0.36 -2.8 2,448,748 - ECD_02359 0.36 +0.2 2,448,777 + ECD_02359 0.37 +0.6 2,448,778 - ECD_02359 0.38 +0.5 2,448,778 - ECD_02359 0.38 +1.0 2,448,948 + ECD_02359 0.46 +0.9 2,449,098 + ECD_02359 0.54 +0.5 2,449,117 + ECD_02359 0.55 -1.0 2,449,147 + ECD_02359 0.56 +0.4 2,449,148 - ECD_02359 0.56 -1.4 2,449,148 - ECD_02359 0.56 +2.1 2,449,278 - ECD_02359 0.63 -0.3 2,449,278 - ECD_02359 0.63 -0.4 2,449,278 - ECD_02359 0.63 +1.1 2,449,279 + ECD_02359 0.63 -0.4 2,449,279 + ECD_02359 0.63 +1.0 2,449,279 + ECD_02359 0.63 -0.3 2,449,279 + ECD_02359 0.63 +0.6 2,449,330 + ECD_02359 0.65 +0.1 2,449,331 - ECD_02359 0.65 +0.1 2,449,380 + ECD_02359 0.68 -0.2 2,449,381 - ECD_02359 0.68 -0.8 2,449,745 - ECD_02359 0.86 +0.5 2,449,754 - ECD_02359 0.87 +0.4 2,449,754 - ECD_02359 0.87 -0.1 2,449,754 - ECD_02359 0.87 +1.0 2,449,862 - -0.6 2,449,862 - -1.2 2,449,889 - -0.8 2,450,079 - -0.1 2,450,112 + -0.1 2,450,113 - -0.7 2,450,116 + -0.1 2,450,130 + +0.5 2,450,194 - -1.1 2,450,352 - -0.2 2,450,464 + ECD_02360 0.14 -0.2 2,450,487 + ECD_02360 0.16 +0.2 2,450,488 - ECD_02360 0.16 -0.6 2,450,488 - ECD_02360 0.16 -0.0 2,450,592 - ECD_02360 0.22 -0.2 2,450,595 - ECD_02360 0.22 +0.3 2,450,598 - ECD_02360 0.22 +0.3 2,450,602 - ECD_02360 0.22 -1.4 2,450,602 - ECD_02360 0.22 -0.1 2,450,614 + ECD_02360 0.23 -0.4 2,450,889 - ECD_02360 0.39 +1.2 2,450,889 - ECD_02360 0.39 +0.4 2,450,970 + ECD_02360 0.44 -0.2 2,450,971 - ECD_02360 0.44 +1.2
Or see this region's nucleotide sequence