Experiment: Tailocin 255
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02046 and ECD_02047 are separated by 60 nucleotides ECD_02047 and ECD_02048 are separated by 306 nucleotides ECD_02048 and ECD_02049 are separated by 10 nucleotides
ECD_02046: ECD_02046 - DUF4132 domain-containing protein, at 2,095,141 to 2,098,773
_02046
ECD_02047: ECD_02047 - uncharacterized protein, at 2,098,834 to 2,099,151
_02047
ECD_02048: ECD_02048 - putative hexameric AAA+ MoxR family ATPase, at 2,099,458 to 2,100,546
_02048
ECD_02049: ECD_02049 - uncharacterized protein, at 2,100,557 to 2,102,836
_02049
Position (kb)
2099
2100
2101 Strain fitness (log2 ratio)
-2
-1
0
1 at 2098.582 kb on + strand at 2099.661 kb on + strand, within ECD_02048 at 2099.818 kb on + strand, within ECD_02048 at 2099.818 kb on + strand, within ECD_02048 at 2099.966 kb on + strand, within ECD_02048 at 2099.971 kb on - strand, within ECD_02048 at 2100.217 kb on - strand, within ECD_02048 at 2100.518 kb on - strand at 2100.724 kb on + strand at 2100.743 kb on + strand at 2101.126 kb on + strand, within ECD_02049 at 2101.140 kb on + strand, within ECD_02049 at 2101.140 kb on + strand, within ECD_02049 at 2101.254 kb on - strand, within ECD_02049 at 2101.483 kb on + strand, within ECD_02049 at 2101.484 kb on - strand, within ECD_02049 at 2101.484 kb on - strand, within ECD_02049 at 2101.488 kb on + strand, within ECD_02049
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 255 remove 2,098,582 + +0.6 2,099,661 + ECD_02048 0.19 -0.7 2,099,818 + ECD_02048 0.33 -0.3 2,099,818 + ECD_02048 0.33 -0.3 2,099,966 + ECD_02048 0.47 -1.9 2,099,971 - ECD_02048 0.47 -0.4 2,100,217 - ECD_02048 0.70 +0.4 2,100,518 - +0.7 2,100,724 + -0.1 2,100,743 + +0.7 2,101,126 + ECD_02049 0.25 +0.4 2,101,140 + ECD_02049 0.26 -1.0 2,101,140 + ECD_02049 0.26 -0.9 2,101,254 - ECD_02049 0.31 -0.8 2,101,483 + ECD_02049 0.41 +1.4 2,101,484 - ECD_02049 0.41 -0.1 2,101,484 - ECD_02049 0.41 -1.1 2,101,488 + ECD_02049 0.41 -1.4
Or see this region's nucleotide sequence