Experiment: Tailocin 255
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02034 and ECD_02035 are separated by 103 nucleotides ECD_02035 and ECD_02036 are separated by 193 nucleotides ECD_02036 and ECD_02037 are separated by 94 nucleotides ECD_02037 and ECD_02038 are separated by 336 nucleotides
ECD_02034: ECD_02034 - hypothetical protein, at 2,083,711 to 2,084,142
_02034
ECD_02035: ECD_02035 - hypothetical protein, at 2,084,246 to 2,084,911
_02035
ECD_02036: ECD_02036 - hypothetical protein, at 2,085,105 to 2,085,368
_02036
ECD_02037: ECD_02037 - hypothetical protein, at 2,085,463 to 2,085,714
_02037
ECD_02038: ECD_02038 - hypothetical protein, at 2,086,051 to 2,086,449
_02038
Position (kb)
2085
2086 Strain fitness (log2 ratio)
-1
0
1 at 2084.141 kb on - strand at 2084.370 kb on + strand, within ECD_02035 at 2084.388 kb on + strand, within ECD_02035 at 2084.537 kb on + strand, within ECD_02035 at 2084.540 kb on - strand, within ECD_02035 at 2084.600 kb on - strand, within ECD_02035 at 2084.617 kb on - strand, within ECD_02035 at 2084.617 kb on - strand, within ECD_02035 at 2084.841 kb on - strand, within ECD_02035 at 2085.255 kb on - strand, within ECD_02036 at 2085.667 kb on + strand, within ECD_02037 at 2085.716 kb on + strand at 2085.793 kb on - strand at 2085.933 kb on + strand at 2086.016 kb on - strand at 2086.069 kb on + strand at 2086.076 kb on + strand at 2086.248 kb on - strand, within ECD_02038
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 255 remove 2,084,141 - +0.5 2,084,370 + ECD_02035 0.19 -0.9 2,084,388 + ECD_02035 0.21 -0.4 2,084,537 + ECD_02035 0.44 -0.4 2,084,540 - ECD_02035 0.44 -0.6 2,084,600 - ECD_02035 0.53 +0.1 2,084,617 - ECD_02035 0.56 +0.0 2,084,617 - ECD_02035 0.56 -1.1 2,084,841 - ECD_02035 0.89 -0.2 2,085,255 - ECD_02036 0.57 +1.0 2,085,667 + ECD_02037 0.81 +1.3 2,085,716 + -0.0 2,085,793 - +0.2 2,085,933 + +0.2 2,086,016 - -0.5 2,086,069 + +0.1 2,086,076 + +0.2 2,086,248 - ECD_02038 0.49 -0.4
Or see this region's nucleotide sequence