Experiment: Tailocin 255
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01261 and ECD_04309 are separated by 89 nucleotides ECD_04309 and ECD_01262 are separated by 146 nucleotides ECD_01262 and ECD_01263 are separated by 234 nucleotides
ECD_01261: ECD_01261 - global regulator of transcription; DeoR family, at 1,329,966 to 1,330,715
_01261
ECD_04309: ECD_04309 - uncharacterized protein, at 1,330,805 to 1,330,978
_04309
ECD_01262: ECD_01262 - cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability, at 1,331,125 to 1,333,110
_01262
ECD_01263: ECD_01263 - ribonuclease II, at 1,333,345 to 1,335,279
_01263
Position (kb)
1331
1332
1333
1334 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1330.167 kb on - strand, within ECD_01261 at 1330.281 kb on - strand, within ECD_01261 at 1330.358 kb on - strand, within ECD_01261 at 1330.377 kb on - strand, within ECD_01261 at 1330.580 kb on - strand, within ECD_01261 at 1330.620 kb on - strand, within ECD_01261 at 1330.841 kb on - strand, within ECD_04309 at 1330.925 kb on - strand, within ECD_04309 at 1331.783 kb on - strand, within ECD_01262 at 1331.783 kb on - strand, within ECD_01262 at 1331.786 kb on - strand, within ECD_01262 at 1331.835 kb on - strand, within ECD_01262 at 1332.034 kb on - strand, within ECD_01262 at 1332.564 kb on - strand, within ECD_01262 at 1332.640 kb on - strand, within ECD_01262 at 1333.632 kb on - strand, within ECD_01263 at 1333.632 kb on - strand, within ECD_01263 at 1333.776 kb on - strand, within ECD_01263 at 1334.032 kb on - strand, within ECD_01263 at 1334.042 kb on + strand, within ECD_01263 at 1334.043 kb on - strand, within ECD_01263 at 1334.043 kb on - strand, within ECD_01263
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 255 remove 1,330,167 - ECD_01261 0.27 +0.4 1,330,281 - ECD_01261 0.42 +0.4 1,330,358 - ECD_01261 0.52 -0.5 1,330,377 - ECD_01261 0.55 +0.5 1,330,580 - ECD_01261 0.82 +1.1 1,330,620 - ECD_01261 0.87 -0.7 1,330,841 - ECD_04309 0.21 -0.0 1,330,925 - ECD_04309 0.69 -0.2 1,331,783 - ECD_01262 0.33 +0.2 1,331,783 - ECD_01262 0.33 -0.8 1,331,786 - ECD_01262 0.33 -2.8 1,331,835 - ECD_01262 0.36 +0.1 1,332,034 - ECD_01262 0.46 +0.2 1,332,564 - ECD_01262 0.72 -1.0 1,332,640 - ECD_01262 0.76 -0.8 1,333,632 - ECD_01263 0.15 -3.0 1,333,632 - ECD_01263 0.15 -1.9 1,333,776 - ECD_01263 0.22 +0.3 1,334,032 - ECD_01263 0.36 +0.4 1,334,042 + ECD_01263 0.36 +0.2 1,334,043 - ECD_01263 0.36 +1.0 1,334,043 - ECD_01263 0.36 -0.1
Or see this region's nucleotide sequence