Experiment: Tailocin 255
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00761 and ECD_00762 overlap by 8 nucleotides ECD_00762 and ECD_00763 overlap by 1 nucleotides ECD_00763 and ECD_00764 are separated by 228 nucleotides
ECD_00761: ECD_00761 - putative ABC transporter ATPase, at 811,237 to 812,973
_00761
ECD_00762: ECD_00762 - putative membrane fusion protein (MFP) component of efflux pump, membrane anchor, at 812,966 to 813,964
_00762
ECD_00763: ECD_00763 - DUF1956 domain-containing tetR family putative transcriptional regulator, at 813,964 to 814,635
_00763
ECD_00764: ECD_00764 - ATP-dependent RNA helicase, at 814,864 to 816,228
_00764
Position (kb) 813
814
815 Strain fitness (log2 ratio) -1
0
1 at 813.050 kb on - strand at 813.174 kb on + strand, within ECD_00762 at 813.214 kb on + strand, within ECD_00762 at 813.228 kb on + strand, within ECD_00762 at 813.229 kb on - strand, within ECD_00762 at 813.229 kb on - strand, within ECD_00762 at 813.464 kb on - strand, within ECD_00762 at 813.539 kb on - strand, within ECD_00762 at 813.573 kb on + strand, within ECD_00762 at 813.574 kb on - strand, within ECD_00762 at 813.588 kb on + strand, within ECD_00762 at 813.595 kb on - strand, within ECD_00762 at 813.770 kb on - strand, within ECD_00762 at 813.841 kb on + strand, within ECD_00762 at 813.965 kb on + strand at 813.966 kb on - strand at 814.073 kb on - strand, within ECD_00763 at 814.073 kb on - strand, within ECD_00763 at 814.314 kb on + strand, within ECD_00763 at 814.315 kb on - strand, within ECD_00763 at 814.461 kb on - strand, within ECD_00763 at 814.484 kb on + strand, within ECD_00763 at 814.485 kb on - strand, within ECD_00763 at 814.488 kb on - strand, within ECD_00763 at 814.814 kb on + strand at 814.829 kb on + strand at 814.860 kb on - strand at 814.863 kb on + strand at 814.863 kb on + strand at 814.864 kb on - strand at 814.864 kb on - strand at 814.864 kb on - strand at 815.164 kb on + strand, within ECD_00764 at 815.205 kb on + strand, within ECD_00764 at 815.205 kb on + strand, within ECD_00764 at 815.445 kb on + strand, within ECD_00764 at 815.445 kb on + strand, within ECD_00764
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 255 remove 813,050 - -0.1 813,174 + ECD_00762 0.21 -1.6 813,214 + ECD_00762 0.25 +0.7 813,228 + ECD_00762 0.26 -1.2 813,229 - ECD_00762 0.26 +0.5 813,229 - ECD_00762 0.26 -0.1 813,464 - ECD_00762 0.50 -0.0 813,539 - ECD_00762 0.57 +0.6 813,573 + ECD_00762 0.61 -0.6 813,574 - ECD_00762 0.61 +0.5 813,588 + ECD_00762 0.62 -0.0 813,595 - ECD_00762 0.63 -0.8 813,770 - ECD_00762 0.80 -0.4 813,841 + ECD_00762 0.88 +1.4 813,965 + +0.4 813,966 - -0.1 814,073 - ECD_00763 0.16 -0.5 814,073 - ECD_00763 0.16 -0.8 814,314 + ECD_00763 0.52 -0.3 814,315 - ECD_00763 0.52 -0.6 814,461 - ECD_00763 0.74 +0.4 814,484 + ECD_00763 0.77 +0.7 814,485 - ECD_00763 0.78 -1.1 814,488 - ECD_00763 0.78 -0.9 814,814 + +0.7 814,829 + -0.6 814,860 - -0.9 814,863 + -0.9 814,863 + -0.6 814,864 - -0.4 814,864 - -0.7 814,864 - +0.0 815,164 + ECD_00764 0.22 -0.6 815,205 + ECD_00764 0.25 +1.0 815,205 + ECD_00764 0.25 +0.8 815,445 + ECD_00764 0.43 +0.6 815,445 + ECD_00764 0.43 +0.4
Or see this region's nucleotide sequence