Strain Fitness in Agrobacterium fabrum C58 around Atu4223

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,347,614	-		Atu4222	0.66	-0.1
1,347,621	+		Atu4222	0.66	-0.6
1,347,685	-		Atu4222	0.69	-0.4
1,347,757	+		Atu4222	0.71	+0.0
1,347,793	-		Atu4222	0.72	+0.1
1,347,823	+		Atu4222	0.73	+0.3
1,347,831	-		Atu4222	0.74	+0.1
1,347,851	-		Atu4222	0.74	-0.1
1,347,913	+		Atu4222	0.76	+0.3
1,347,919	+		Atu4222	0.77	-0.1
1,347,925	+		Atu4222	0.77	+0.7
1,348,165	-		Atu4222	0.85	-0.2
1,348,225	+		Atu4222	0.87	+0.4
1,348,251	+		Atu4222	0.88	+0.7
1,348,262	+		Atu4222	0.88	+0.6
1,348,348	-				-0.1
1,348,372	-				+0.5
1,348,391	-				-0.9
1,348,500	+				-0.2
1,348,500	+				+0.7
1,348,500	+				-0.3
1,348,528	+				+0.3
1,348,566	+				-1.9
1,348,668	+		Atu4223	0.21	+0.7
1,348,696	-		Atu4223	0.31	+0.5
1,348,877	-				-0.5
1,348,877	-				-0.1
1,348,908	+				+0.2
1,348,926	-				+0.0
1,348,988	+				+0.1
1,349,057	+		Atu4224	0.12	-0.4
1,349,088	+		Atu4224	0.14	-0.4
1,349,116	-		Atu4224	0.16	+0.5
1,349,116	-		Atu4224	0.16	-0.7
1,349,129	-		Atu4224	0.17	+0.1
1,349,284	+		Atu4224	0.30	-0.1
1,349,330	-		Atu4224	0.33	-0.3
1,349,371	-		Atu4224	0.37	+0.2
1,349,396	-		Atu4224	0.39	+0.3
1,349,401	-		Atu4224	0.39	+0.1
1,349,439	-		Atu4224	0.42	-0.4
1,349,449	-		Atu4224	0.43	+0.2
1,349,548	-		Atu4224	0.51	+0.4
1,349,553	+		Atu4224	0.51	-1.0
1,349,561	-		Atu4224	0.52	-0.3
1,349,579	+		Atu4224	0.53	-0.1
1,349,598	+		Atu4224	0.55	-0.1
1,349,607	-		Atu4224	0.56	+0.0
1,349,708	-		Atu4224	0.64	+0.5
1,349,745	-		Atu4224	0.67	+0.8
1,349,765	+		Atu4224	0.68	-0.1
1,349,768	+		Atu4224	0.69	-0.1
1,349,860	-		Atu4224	0.76	-1.1