Strain Fitness in Agrobacterium fabrum C58 around Atu3961

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,064,403	-				-0.3
1,064,414	+				-0.6
1,064,422	-				+1.7
1,064,426	+				-0.1
1,064,426	+				-0.1
1,064,434	-				+0.0
1,064,504	-				-0.1
1,064,554	-		Atu3960	0.13	-0.5
1,064,699	+		Atu3960	0.29	-0.3
1,064,699	+		Atu3960	0.29	-0.2
1,064,699	+		Atu3960	0.29	+0.0
1,064,707	-		Atu3960	0.30	-1.2
1,064,791	+		Atu3960	0.39	+0.7
1,064,799	-		Atu3960	0.40	-0.3
1,064,799	-		Atu3960	0.40	-0.1
1,064,799	-		Atu3960	0.40	+0.3
1,064,938	+		Atu3960	0.55	-0.1
1,064,938	+		Atu3960	0.55	-1.5
1,064,946	-		Atu3960	0.56	+0.0
1,065,151	+		Atu3960	0.78	+0.0
1,065,180	+		Atu3960	0.82	+1.1
1,065,188	-		Atu3960	0.82	-0.4
1,065,188	-		Atu3960	0.82	+0.5
1,065,188	-		Atu3960	0.82	+0.0
1,065,247	+		Atu3960	0.89	+0.4
1,065,268	+				-0.7
1,065,311	+				-0.3
1,065,311	+				-0.2
1,065,335	-				+0.2
1,065,489	-		Atu3961	0.19	-0.3
1,065,533	+		Atu3961	0.25	-2.0
1,065,684	+		Atu3961	0.45	-0.4
1,065,692	-		Atu3961	0.46	-0.1
1,065,692	-		Atu3961	0.46	+1.1
1,065,692	-		Atu3961	0.46	+0.2
1,065,694	-		Atu3961	0.47	+1.0
1,065,800	+		Atu3961	0.61	+1.4
1,065,845	-		Atu3961	0.67	+0.4
1,065,953	-		Atu3961	0.81	+0.4
1,066,272	+				-0.1
1,066,274	-				+0.3
1,066,304	+				+1.1
1,066,318	+				-0.0
1,066,323	+				+0.3
1,066,326	-				-0.1
1,066,328	+				-0.1
1,066,336	-				-0.0
1,066,383	-				+0.0
1,066,449	-				+0.5
1,066,453	-				+1.3
1,066,515	+				+0.4
1,066,515	+				+0.3
1,066,523	-				+0.0
1,066,590	+				+0.2
1,066,613	+				-2.1
1,066,690	-		Atu3962	0.13	+0.4
1,066,693	+		Atu3962	0.13	+0.1
1,066,710	-		Atu3962	0.15	+0.4
1,066,844	-		Atu3962	0.32	+1.1
1,066,845	-		Atu3962	0.32	-0.2
1,066,937	-		Atu3962	0.43	-0.3
1,067,037	-		Atu3962	0.56	+1.3
1,067,037	-		Atu3962	0.56	+0.1
1,067,092	-		Atu3962	0.63	+0.8
1,067,092	-		Atu3962	0.63	-0.2