Strain Fitness in Agrobacterium fabrum C58 around Atu2831
Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenoxyacetic 5 mM |
---|---|---|---|---|---|
remove | |||||
2,834,938 | - | +1.0 | |||
2,835,275 | + | Atu2831 | 0.15 | -0.7 | |
2,835,310 | - | Atu2831 | 0.17 | -0.3 | |
2,835,351 | + | Atu2831 | 0.20 | -0.5 | |
2,835,429 | - | Atu2831 | 0.24 | -0.5 | |
2,835,714 | - | Atu2831 | 0.39 | +0.1 | |
2,835,887 | - | Atu2831 | 0.48 | -0.7 | |
2,835,887 | - | Atu2831 | 0.48 | -0.4 | |
2,835,887 | - | Atu2831 | 0.48 | -0.3 | |
2,836,383 | + | Atu2831 | 0.74 | -0.4 | |
2,836,391 | - | Atu2831 | 0.75 | -0.8 | |
2,836,907 | - | +1.4 | |||
2,836,917 | - | +0.3 | |||
2,837,056 | - | -0.3 | |||
2,837,378 | + | Atu2832 | 0.34 | -0.3 | |
2,837,528 | + | Atu2832 | 0.45 | -1.4 | |
2,837,558 | - | Atu2832 | 0.47 | -0.8 | |
2,837,678 | + | Atu2832 | 0.56 | -1.5 |
Or see this region's nucleotide sequence