Strain Fitness in Agrobacterium fabrum C58 around Atu2640
Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenoxyacetic 5 mM |
---|---|---|---|---|---|
remove | |||||
2,626,006 | - | -0.9 | |||
2,626,179 | + | Atu2640 | 0.21 | -0.9 | |
2,626,233 | - | Atu2640 | 0.26 | -0.5 | |
2,626,255 | - | Atu2640 | 0.27 | +0.2 | |
2,626,356 | - | Atu2640 | 0.36 | +0.6 | |
2,626,363 | + | Atu2640 | 0.37 | -0.8 | |
2,626,400 | + | Atu2640 | 0.40 | -0.6 | |
2,626,404 | + | Atu2640 | 0.40 | -1.4 | |
2,626,422 | + | Atu2640 | 0.42 | -2.3 | |
2,626,453 | - | Atu2640 | 0.44 | -0.5 | |
2,626,455 | + | Atu2640 | 0.45 | -0.2 | |
2,626,463 | - | Atu2640 | 0.45 | +0.2 | |
2,626,802 | + | Atu2640 | 0.74 | +0.1 | |
2,626,810 | - | Atu2640 | 0.75 | -0.7 | |
2,626,869 | + | Atu2640 | 0.80 | -3.3 | |
2,627,160 | - | -0.2 | |||
2,627,794 | - | +0.2 | |||
2,627,811 | - | -0.6 | |||
2,627,811 | - | -0.4 | |||
2,627,893 | + | -0.1 |
Or see this region's nucleotide sequence