Strain Fitness in Agrobacterium fabrum C58 around Atu2603

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,581,391	+				-1.7
2,581,465	+				-0.4
2,581,482	+				-0.1
2,581,612	-				-0.0
2,581,710	-		Atu2602	0.21	+0.1
2,581,810	-		Atu2602	0.32	-0.8
2,581,827	-		Atu2602	0.34	+0.1
2,581,954	+		Atu2602	0.49	-0.6
2,581,962	-		Atu2602	0.50	+0.7
2,581,962	-		Atu2602	0.50	-0.1
2,581,998	+		Atu2602	0.54	+0.3
2,582,082	+		Atu2602	0.64	-2.2
2,582,082	+		Atu2602	0.64	+0.0
2,582,091	-		Atu2602	0.65	-0.3
2,582,118	-		Atu2602	0.68	-0.4
2,582,185	-		Atu2602	0.76	+0.4
2,582,189	-		Atu2602	0.76	-0.6
2,582,224	-		Atu2602	0.81	+0.4
2,582,235	-		Atu2602	0.82	-0.2
2,582,237	-		Atu2602	0.82	-1.1
2,582,281	-		Atu2602	0.87	-0.0
2,582,462	+				+1.0
2,582,470	-				+0.3
2,582,673	+		Atu2603	0.32	+1.3
2,582,683	+		Atu2603	0.33	+0.0
2,582,774	+		Atu2603	0.44	+0.4
2,582,900	-		Atu2603	0.58	-0.2
2,582,961	+		Atu2603	0.65	+0.4
2,582,986	-		Atu2603	0.68	-0.0
2,583,006	+		Atu2603	0.70	-0.1
2,583,009	-		Atu2603	0.70	+1.4
2,583,276	-				+0.3
2,583,283	+				+1.5
2,583,291	-				+0.1
2,583,291	-				-0.8
2,583,315	-				-0.1
2,583,315	-				-0.0
2,583,326	+				-0.5
2,583,326	+				+0.2
2,583,334	-				-0.2
2,583,427	-		Atu2604	0.12	-0.2
2,583,502	+		Atu2604	0.18	-0.2
2,583,510	-		Atu2604	0.19	-0.1
2,583,510	-		Atu2604	0.19	-0.2
2,583,540	-		Atu2604	0.22	-1.5
2,583,617	+		Atu2604	0.28	+1.0
2,583,618	-		Atu2604	0.28	+0.4
2,583,625	-		Atu2604	0.29	-0.4
2,583,755	+		Atu2604	0.40	-0.4
2,583,794	+		Atu2604	0.43	-0.3
2,583,843	+		Atu2604	0.47	+0.4
2,583,981	-		Atu2604	0.59	-0.1
2,584,045	+		Atu2604	0.64	-0.6
2,584,045	+		Atu2604	0.64	+0.2
2,584,045	+		Atu2604	0.64	+0.5
2,584,053	-		Atu2604	0.65	+0.8
2,584,089	+		Atu2604	0.68	+1.2
2,584,134	+		Atu2604	0.72	+0.4
2,584,268	-		Atu2604	0.83	-0.5