Strain Fitness in Agrobacterium fabrum C58 around Atu2450

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,420,996	+		Atu2448	0.60	-0.7
2,421,032	+		Atu2448	0.64	+0.4
2,421,086	+		Atu2448	0.70	-0.6
2,421,086	+		Atu2448	0.70	+0.4
2,421,086	+		Atu2448	0.70	-0.3
2,421,086	+		Atu2448	0.70	-0.5
2,421,094	-		Atu2448	0.71	-0.3
2,421,094	-		Atu2448	0.71	+0.1
2,421,096	+		Atu2448	0.71	-0.2
2,421,101	+		Atu2448	0.72	-0.2
2,421,177	-		Atu2448	0.80	+0.1
2,421,185	-		Atu2448	0.81	+0.0
2,421,187	+		Atu2448	0.81	+0.3
2,421,220	-		Atu2448	0.85	+0.1
2,421,276	+				-0.3
2,421,281	+				-0.1
2,421,306	-				-0.1
2,421,306	-				+0.1
2,421,384	+				-0.3
2,421,455	-				-0.1
2,421,475	+				+0.9
2,421,516	+		Atu2449	0.13	-0.1
2,421,552	+		Atu2449	0.19	+0.7
2,421,562	-		Atu2449	0.21	-0.3
2,421,602	+		Atu2449	0.29	+0.7
2,421,610	-		Atu2449	0.30	-0.3
2,421,643	+		Atu2449	0.36	-0.3
2,421,649	+		Atu2449	0.37	+0.6
2,421,758	+		Atu2449	0.58	-0.3
2,421,766	-		Atu2449	0.59	-0.1
2,421,773	-		Atu2449	0.61	-0.0
2,421,807	-		Atu2449	0.67	+0.1
2,421,827	+		Atu2449	0.71	-0.5
2,421,874	-		Atu2449	0.80	+0.1
2,421,930	-				+0.9
2,421,956	+				+0.1
2,421,982	+				+1.7
2,422,007	+				-0.1
2,422,007	+				+0.2
2,422,052	-		Atu2450	0.21	+0.6
2,422,108	-		Atu2450	0.38	+0.4
2,422,252	-		Atu2450	0.83	+0.9
2,422,293	+				+0.5
2,422,303	-				+0.6
2,422,348	+				-0.3
2,422,353	+				-0.5
2,422,364	+				-0.3
2,422,384	-				-0.5
2,422,399	+				+0.1
2,422,407	-				-0.3
2,422,426	-				+0.9
2,422,441	+				-0.0
2,422,520	+				+0.2
2,422,520	+				-0.4
2,422,540	-				+0.9
2,422,565	-				-0.4
2,422,677	+				+0.2
2,422,688	+				-0.9
2,422,738	-		Atu2451	0.14	+0.2
2,422,851	-		Atu2451	0.33	+0.4
2,422,931	+		Atu2451	0.47	-0.3
2,422,931	+		Atu2451	0.47	-0.2
2,422,931	+		Atu2451	0.47	-0.7
2,422,939	-		Atu2451	0.48	-0.2
2,422,939	-		Atu2451	0.48	+0.4
2,422,939	-		Atu2451	0.48	+0.0
2,422,946	-		Atu2451	0.49	-0.1
2,422,968	+		Atu2451	0.53	-0.1
2,422,976	-		Atu2451	0.54	+0.7
2,423,044	+		Atu2451	0.66	+0.9
2,423,081	-		Atu2451	0.72	-0.0
2,423,165	+		Atu2451	0.87	+0.0
2,423,167	+		Atu2451	0.87	-0.2
2,423,213	+				-0.1
2,423,225	-				+0.6
2,423,292	-				+0.5