Strain Fitness in Agrobacterium fabrum C58 around Atu2320

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,296,815	-		Atu2318	0.69	-1.0
2,296,937	+		Atu2318	0.80	+1.1
2,296,989	-		Atu2318	0.84	+0.3
2,297,069	+				-0.1
2,297,188	-				+0.2
2,297,196	+				-0.9
2,297,247	-				-0.6
2,297,257	-				-0.1
2,297,271	-				+0.3
2,297,281	-				+0.4
2,297,308	+				-0.0
2,297,365	-				-0.3
2,297,372	-				+0.4
2,297,372	-				-0.6
2,297,422	+		Atu2319	0.16	+0.3
2,297,430	-		Atu2319	0.19	+0.0
2,297,504	-		Atu2319	0.40	+0.1
2,297,531	-		Atu2319	0.48	-0.2
2,297,555	+		Atu2319	0.55	-0.6
2,297,601	+		Atu2319	0.68	-0.2
2,297,633	+		Atu2319	0.77	+0.2
2,297,749	+				-0.4
2,297,872	+		Atu2320	0.28	-0.1
2,297,933	+		Atu2320	0.39	+0.8
2,297,941	-		Atu2320	0.40	+0.2
2,297,941	-		Atu2320	0.40	+0.0
2,298,004	-		Atu2320	0.51	+0.4
2,298,242	+				-0.4
2,298,421	-				-0.2
2,298,452	+				+0.5
2,298,455	-				-0.1
2,298,488	+				-1.1
2,298,550	-				-0.6
2,298,555	-				+0.1
2,298,619	+		Atu2321	0.12	-0.1
2,298,684	-		Atu2321	0.18	-0.0
2,298,687	-		Atu2321	0.18	-0.1
2,298,696	-		Atu2321	0.18	-0.2
2,298,711	-		Atu2321	0.20	-1.8
2,298,711	-		Atu2321	0.20	+0.1
2,298,746	+		Atu2321	0.22	+0.2
2,298,776	+		Atu2321	0.25	+0.8
2,298,784	-		Atu2321	0.25	-0.3
2,298,784	-		Atu2321	0.25	-0.3
2,298,837	+		Atu2321	0.29	-0.2
2,298,846	-		Atu2321	0.30	-0.5
2,298,915	+		Atu2321	0.35	-0.1
2,298,925	+		Atu2321	0.36	+0.5
2,298,945	-		Atu2321	0.38	-0.1
2,298,971	-		Atu2321	0.40	+0.1
2,299,127	-		Atu2321	0.52	+0.2
2,299,137	-		Atu2321	0.52	-0.2
2,299,137	-		Atu2321	0.52	+0.1
2,299,137	-		Atu2321	0.52	+0.0
2,299,147	+		Atu2321	0.53	+0.1
2,299,155	-		Atu2321	0.54	+0.2
2,299,155	-		Atu2321	0.54	-0.2
2,299,254	+		Atu2321	0.61	+0.3
2,299,262	-		Atu2321	0.62	+0.0