Strain Fitness in Agrobacterium fabrum C58 around Atu2177

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,148,886	+		Atu2175	0.86	-0.5
2,148,923	+		Atu2175	0.90	+0.1
2,148,950	-				-0.1
2,149,064	+				-0.2
2,149,066	+				+0.0
2,149,089	+				-0.3
2,149,110	+				+0.2
2,149,173	-		Atu2176	0.12	+1.5
2,149,281	+		Atu2176	0.34	-0.7
2,149,281	+		Atu2176	0.34	+1.0
2,149,289	-		Atu2176	0.36	+0.0
2,149,354	+		Atu2176	0.49	-0.1
2,149,450	+		Atu2176	0.69	+3.2
2,149,468	-		Atu2176	0.72	-0.7
2,149,468	-		Atu2176	0.72	-1.3
2,149,485	-		Atu2176	0.76	+0.0
2,149,547	-		Atu2176	0.89	+0.9
2,149,561	-				+0.2
2,149,600	+				+0.2
2,149,618	-				+0.4
2,149,809	+				-0.2
2,149,824	+				-0.2
2,149,824	+				+0.3
2,149,863	+				-0.2
2,149,875	+				-0.3
2,149,915	-				-0.3
2,149,963	+		Atu2177	0.13	+1.6
2,149,972	+		Atu2177	0.14	+0.1
2,149,972	+		Atu2177	0.14	+0.6
2,149,982	+		Atu2177	0.16	-0.0
2,150,146	-		Atu2177	0.42	+0.3
2,150,175	-		Atu2177	0.46	+0.4
2,150,181	-		Atu2177	0.47	+0.2
2,150,347	+		Atu2177	0.73	-0.1
2,150,379	-		Atu2177	0.78	+0.2
2,150,470	-				-0.4
2,150,473	+				+0.1
2,150,510	+				-0.2
2,150,517	+				-0.3