Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu1509 and Atu1510 are separated by 41 nucleotides Atu1510 and Atu1511 overlap by 8 nucleotides Atu1511 and Atu1512 are separated by 90 nucleotides Atu1512 and Atu1513 are separated by 306 nucleotides
Atu1509: Atu1509 - hypothetical protein, at 1,499,733 to 1,500,881
Atu1509
Atu1510: Atu1510 - hypothetical protein, at 1,500,923 to 1,501,213
Atu1510
Atu1511: Atu1511 - hypothetical protein, at 1,501,206 to 1,501,472
Atu1511
Atu1512: Atu1512 - single-strand DNA binding protein, at 1,501,563 to 1,502,084
Atu1512
Atu1513: Atu1513 - ABC excinuclease subunit A, at 1,502,391 to 1,505,312
Atu1513
Position (kb)
1501
1502 Strain fitness (log2 ratio)
-1
0
1 at 1500.220 kb on - strand, within Atu1509 at 1500.240 kb on + strand, within Atu1509 at 1500.400 kb on + strand, within Atu1509 at 1500.417 kb on + strand, within Atu1509 at 1500.483 kb on + strand, within Atu1509 at 1500.517 kb on + strand, within Atu1509 at 1500.556 kb on - strand, within Atu1509 at 1500.689 kb on - strand, within Atu1509 at 1500.701 kb on - strand, within Atu1509 at 1500.709 kb on - strand, within Atu1509 at 1500.739 kb on - strand, within Atu1509 at 1500.884 kb on - strand at 1500.884 kb on - strand at 1500.903 kb on - strand at 1500.905 kb on + strand at 1501.010 kb on + strand, within Atu1510 at 1501.028 kb on + strand, within Atu1510 at 1501.036 kb on - strand, within Atu1510 at 1501.123 kb on - strand, within Atu1510 at 1501.144 kb on + strand, within Atu1510 at 1501.167 kb on - strand, within Atu1510 at 1501.353 kb on - strand, within Atu1511 at 1501.450 kb on - strand at 1501.552 kb on - strand at 1501.555 kb on - strand at 1502.203 kb on + strand at 1502.316 kb on - strand at 1502.349 kb on - strand at 1502.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenoxyacetic 5 mM remove 1,500,220 - Atu1509 0.42 +0.3 1,500,240 + Atu1509 0.44 -0.1 1,500,400 + Atu1509 0.58 -0.1 1,500,417 + Atu1509 0.60 -0.0 1,500,483 + Atu1509 0.65 +0.6 1,500,517 + Atu1509 0.68 -0.5 1,500,556 - Atu1509 0.72 +1.0 1,500,689 - Atu1509 0.83 -0.0 1,500,701 - Atu1509 0.84 +0.1 1,500,709 - Atu1509 0.85 -0.7 1,500,739 - Atu1509 0.88 -0.2 1,500,884 - -0.9 1,500,884 - -1.0 1,500,903 - -0.1 1,500,905 + -0.0 1,501,010 + Atu1510 0.30 -0.0 1,501,028 + Atu1510 0.36 +0.2 1,501,036 - Atu1510 0.39 -0.2 1,501,123 - Atu1510 0.69 +0.5 1,501,144 + Atu1510 0.76 +0.1 1,501,167 - Atu1510 0.84 +0.2 1,501,353 - Atu1511 0.55 +0.2 1,501,450 - -0.1 1,501,552 - +0.0 1,501,555 - -0.2 1,502,203 + -0.1 1,502,316 - -0.1 1,502,349 - +0.3 1,502,445 - -0.9
Or see this region's nucleotide sequence