Strain Fitness in Agrobacterium fabrum C58 around Atu1007

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,003,483	+				-0.3
1,003,491	-				-0.1
1,003,514	-				+0.1
1,003,521	+				-0.0
1,003,530	+				+0.2
1,003,536	-				-0.8
1,003,576	+				+0.2
1,003,576	+				+0.1
1,003,576	+				-0.1
1,003,576	+				+0.2
1,003,584	-				+0.6
1,003,655	-				-0.6
1,003,698	-		Atu1007	0.16	-0.1
1,003,716	+		Atu1007	0.23	-0.1
1,003,716	+		Atu1007	0.23	+1.0
1,003,724	-		Atu1007	0.27	+0.9
1,003,796	+		Atu1007	0.55	+0.8
1,003,874	-		Atu1007	0.86	+0.7
1,003,919	-				-1.1
1,003,936	+				+0.7
1,004,002	+				+0.6
1,004,002	+				-0.5
1,004,010	-				-0.1
1,004,031	+				+0.2
1,004,049	-				-0.2
1,004,049	-				+0.1
1,004,049	-				+1.2
1,004,084	+				-0.5
1,004,084	+				+0.8
1,004,084	-				+0.8
1,004,282	-		Atu1008	0.43	-0.4
1,004,321	+		Atu1008	0.49	+0.8
1,004,331	+		Atu1008	0.51	+0.9
1,004,337	-		Atu1008	0.52	-0.2
1,004,411	+		Atu1008	0.64	-1.1
1,004,411	-		Atu1008	0.64	+0.0
1,004,455	-		Atu1008	0.72	+0.3
1,004,529	-		Atu1008	0.84	+0.1
1,004,545	+		Atu1008	0.87	+0.4
1,004,587	-				-0.1
1,004,612	+				-0.0
1,004,613	+				+0.1
1,004,620	-				+0.1
1,004,620	-				+0.1
1,004,620	-				+1.5
1,004,670	+				-0.1
1,004,670	+				-0.3
1,004,815	-		Atu1009	0.17	-0.8