Strain Fitness in Agrobacterium fabrum C58 around Atu4798

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,972,275	+		Atu4796	0.71	+0.1
1,972,290	+		Atu4796	0.74	+0.3
1,972,290	+		Atu4796	0.74	+0.3
1,972,325	+		Atu4796	0.79	+1.3
1,972,333	-		Atu4796	0.80	+0.0
1,972,333	-		Atu4796	0.80	-0.5
1,972,349	+		Atu4796	0.83	+0.6
1,972,357	-		Atu4796	0.84	+0.0
1,972,363	+		Atu4796	0.85	-0.8
1,972,363	+		Atu4796	0.85	-0.4
1,972,371	-		Atu4796	0.86	+0.2
1,972,482	-				-0.0
1,972,564	-		Atu4797	0.12	+0.4
1,972,590	+		Atu4797	0.15	-0.5
1,972,590	+		Atu4797	0.15	-0.7
1,972,725	-		Atu4797	0.32	-0.5
1,972,922	-		Atu4797	0.56	-0.1
1,972,942	+		Atu4797	0.59	+0.8
1,972,950	-		Atu4797	0.60	+0.2
1,972,950	-		Atu4797	0.60	-1.3
1,972,955	+		Atu4797	0.60	+0.4
1,972,963	-		Atu4797	0.61	+0.1
1,972,999	-		Atu4797	0.66	-0.1
1,973,022	-		Atu4797	0.69	+0.1
1,973,142	+		Atu4797	0.83	+0.8
1,973,143	-		Atu4797	0.84	-0.1
1,973,143	-		Atu4797	0.84	+0.3
1,973,178	+		Atu4797	0.88	+1.1
1,973,191	-		Atu4797	0.89	+0.3
1,973,191	-		Atu4797	0.89	-0.3
1,973,267	-				+0.4
1,973,270	+				+0.2
1,973,306	-				+1.3
1,973,623	-		Atu4798	0.27	-0.4
1,973,646	+		Atu4798	0.29	+0.2
1,973,654	-		Atu4798	0.29	-0.1
1,973,675	-		Atu4798	0.31	+0.2
1,973,744	-		Atu4798	0.36	+0.7
1,973,767	+		Atu4798	0.38	+0.9
1,973,784	+		Atu4798	0.40	-0.5
1,973,882	-		Atu4798	0.47	+0.4
1,974,036	-		Atu4798	0.59	+0.0
1,974,070	-		Atu4798	0.62	+0.6
1,974,144	+		Atu4798	0.67	+0.1
1,974,147	-		Atu4798	0.68	+1.2
1,974,157	+		Atu4798	0.68	+0.4
1,974,186	+		Atu4798	0.71	-0.0
1,974,290	-		Atu4798	0.79	+1.9
1,974,456	+				-0.0
1,974,457	-				+0.2
1,974,476	+				+1.4
1,974,476	+				-0.2
1,974,537	-				-1.0
1,974,738	+				-0.3
1,974,749	+				-0.0
1,974,749	+				+0.2
1,974,777	+				+0.0
1,974,792	-				-0.5
1,974,863	-				+0.5
1,974,899	+				-0.1
1,974,914	+				-0.3
1,974,932	-		Atu4799	0.12	-0.0
1,975,030	-		Atu4799	0.30	-0.7
1,975,039	+		Atu4799	0.32	+0.1
1,975,047	-		Atu4799	0.34	-0.1
1,975,104	+		Atu4799	0.44	+0.1
1,975,199	+		Atu4799	0.62	-0.2
1,975,202	-		Atu4799	0.63	+0.3
1,975,207	-		Atu4799	0.64	+0.2
1,975,207	-		Atu4799	0.64	-0.9
1,975,254	+		Atu4799	0.73	+0.0
1,975,292	-		Atu4799	0.80	-0.2
1,975,330	+		Atu4799	0.87	+1.3
1,975,379	-				-0.2
1,975,390	+				+1.3
1,975,399	+				+0.2
1,975,399	+				-0.5
1,975,408	+				+0.1
1,975,439	+				+0.1
1,975,561	-		Atu4800	0.12	-0.1