Strain Fitness in Agrobacterium fabrum C58 around Atu3979

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,092,347	-				+0.2
1,092,391	-		Atu3978	0.11	+1.0
1,092,487	+		Atu3978	0.21	-0.7
1,092,487	+		Atu3978	0.21	-0.3
1,092,487	+		Atu3978	0.21	-0.5
1,092,500	-		Atu3978	0.23	-0.0
1,092,525	-		Atu3978	0.26	+0.2
1,092,583	+		Atu3978	0.32	-0.2
1,092,624	+		Atu3978	0.37	+0.4
1,092,627	-		Atu3978	0.37	+0.4
1,092,713	+		Atu3978	0.46	+0.4
1,092,713	+		Atu3978	0.46	+1.1
1,092,721	-		Atu3978	0.47	-0.8
1,092,721	-		Atu3978	0.47	-0.3
1,092,721	-		Atu3978	0.47	-0.2
1,092,721	-		Atu3978	0.47	+0.3
1,092,794	+		Atu3978	0.55	+0.3
1,092,914	+		Atu3978	0.69	-0.5
1,092,983	+		Atu3978	0.76	-0.2
1,092,985	+		Atu3978	0.77	-0.4
1,093,040	-		Atu3978	0.83	+0.6
1,093,059	-		Atu3978	0.85	+0.3
1,093,065	+		Atu3978	0.86	-0.4
1,093,179	-				-0.6
1,093,331	+				-0.1
1,093,341	+				+0.3
1,093,341	+				+0.6
1,093,344	-				-0.0
1,093,349	-				+0.1
1,093,422	-		Atu3979	0.12	+0.5
1,093,505	-		Atu3979	0.21	-1.8
1,093,667	-		Atu3979	0.38	+1.2
1,093,746	+		Atu3979	0.46	+0.2
1,093,846	+		Atu3979	0.57	-0.9
1,093,846	+		Atu3979	0.57	+0.3
1,093,896	+		Atu3979	0.62	-0.0
1,093,963	-		Atu3979	0.70	+2.0
1,094,018	+		Atu3979	0.76	+0.3
1,094,023	+		Atu3979	0.76	+0.1
1,094,026	-		Atu3979	0.76	+0.5
1,094,076	-		Atu3979	0.82	+0.1
1,094,097	+		Atu3979	0.84	-0.2
1,094,141	-		Atu3979	0.89	+0.7
1,094,162	-				-0.1
1,094,179	-				-0.3
1,094,184	-				+0.0
1,094,238	+				-0.6
1,094,256	+				-0.5
1,094,288	+				+0.3
1,094,436	+				+0.1
1,094,483	+		Atu3980	0.14	-0.6
1,094,493	+		Atu3980	0.16	+0.6
1,094,576	+		Atu3980	0.28	+0.2
1,094,586	+		Atu3980	0.29	+0.2
1,094,588	-		Atu3980	0.30	-0.4
1,094,594	-		Atu3980	0.30	+0.3
1,094,596	+		Atu3980	0.31	-0.3
1,094,644	+		Atu3980	0.38	-0.0
1,094,644	+		Atu3980	0.38	+0.1
1,094,742	+		Atu3980	0.52	-0.2
1,094,866	-		Atu3980	0.70	+0.1
1,094,866	-		Atu3980	0.70	-0.4
1,094,875	-		Atu3980	0.71	+0.3
1,094,876	+		Atu3980	0.71	-0.8
1,094,926	+		Atu3980	0.79	-0.3
1,095,011	+				+0.7
1,095,013	+				+0.4
1,095,018	+				-0.2
1,095,018	+				-0.3
1,095,026	-				+0.4
1,095,026	-				-0.3
1,095,029	-				-0.2
1,095,038	-				-0.2
1,095,053	+				-0.1
1,095,121	+				-0.1
1,095,129	-				+0.5
1,095,160	-				+0.4
1,095,193	-		Atu8193	0.16	+0.1
1,095,209	-		Atu8193	0.21	-0.1