Strain Fitness in Agrobacterium fabrum C58 around Atu3963

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,066,590	+				-0.7
1,066,613	+				-1.3
1,066,690	-		Atu3962	0.13	+0.9
1,066,693	+		Atu3962	0.13	+0.7
1,066,710	-		Atu3962	0.15	-0.2
1,066,844	-		Atu3962	0.32	-0.0
1,066,845	-		Atu3962	0.32	-1.3
1,066,937	-		Atu3962	0.43	+0.1
1,067,037	-		Atu3962	0.56	-0.5
1,067,037	-		Atu3962	0.56	-0.2
1,067,092	-		Atu3962	0.63	-0.7
1,067,092	-		Atu3962	0.63	-0.5
1,067,118	+		Atu3962	0.66	+0.3
1,067,196	+		Atu3962	0.75	+0.6
1,067,214	-		Atu3962	0.78	+0.4
1,067,219	-		Atu3962	0.78	+0.1
1,067,302	-		Atu3962	0.89	-0.7
1,067,304	-		Atu3962	0.89	+0.0
1,067,495	+				-1.0
1,067,506	+				-0.0
1,067,532	+				-0.9
1,067,540	-				+0.1
1,067,540	-				+0.6
1,067,545	-				-0.1
1,067,545	-				-0.1
1,067,555	-				-0.1
1,067,592	+				-0.3
1,067,637	+		Atu3963	0.15	-1.2
1,067,657	-		Atu3963	0.17	-0.2
1,067,658	-		Atu3963	0.18	-0.6
1,067,756	+		Atu3963	0.32	-1.2
1,067,841	+		Atu3963	0.44	-0.3
1,067,841	+		Atu3963	0.44	-0.6
1,067,849	-		Atu3963	0.45	-0.1
1,067,849	-		Atu3963	0.45	-0.2
1,067,875	-		Atu3963	0.49	+0.1
1,067,958	-		Atu3963	0.61	-1.0
1,067,965	+		Atu3963	0.62	-0.8
1,068,163	+		Atu3963	0.90	-1.4
1,068,163	+		Atu3963	0.90	-0.4
1,068,171	-				-0.8
1,068,197	-				-0.9
1,068,332	+				-0.2
1,068,361	+				-0.0
1,068,458	-				-0.1
1,068,545	+		Atu3964	0.15	+0.1
1,068,582	+		Atu3964	0.19	-0.4
1,068,677	-		Atu3964	0.28	+0.2
1,068,693	-		Atu3964	0.30	+0.4
1,068,844	+		Atu3964	0.45	-1.1
1,068,857	-		Atu3964	0.46	-0.2
1,068,885	-		Atu3964	0.49	-0.1
1,068,901	+		Atu3964	0.50	-0.7
1,068,909	-		Atu3964	0.51	+0.4
1,069,002	+		Atu3964	0.60	-1.6
1,069,071	-		Atu3964	0.67	-0.2
1,069,179	+		Atu3964	0.78	+0.3
1,069,226	+		Atu3964	0.82	-0.1
1,069,227	+		Atu3964	0.82	+0.0
1,069,227	+		Atu3964	0.82	+0.5