Strain Fitness in Agrobacterium fabrum C58 around Atu3010

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
5,738	+		Atu3009	0.21	-0.5
5,885	-		Atu3009	0.35	-2.0
6,549	+				-0.6
6,549	+				-0.6
6,647	-				+0.1
6,673	-				+1.1
6,678	-				-0.2
6,715	-		Atu3010	0.12	+0.4
6,736	+		Atu3010	0.14	-0.8
6,736	+		Atu3010	0.14	-0.5
6,736	+		Atu3010	0.14	-0.2
6,834	-		Atu3010	0.25	-0.7
6,854	-		Atu3010	0.27	-1.3
6,869	+		Atu3010	0.29	-0.9
6,912	-		Atu3010	0.33	-0.7
6,952	+		Atu3010	0.38	-0.5
7,007	+		Atu3010	0.44	-0.3
7,060	+		Atu3010	0.49	-1.7
7,111	-		Atu3010	0.55	-1.3
7,111	-		Atu3010	0.55	+0.5
7,111	-		Atu3010	0.55	-1.0
7,185	-		Atu3010	0.63	-0.3
7,194	+		Atu3010	0.64	-0.3
7,202	-		Atu3010	0.65	+0.1
7,311	+		Atu3010	0.77	+0.9
7,357	+		Atu3010	0.81	-0.3
7,364	+		Atu3010	0.82	-0.9
7,365	+		Atu3010	0.82	-0.7
7,366	-		Atu3010	0.82	-0.8
7,383	-		Atu3010	0.84	-0.9
7,403	+		Atu3010	0.86	-1.4
7,403	+		Atu3010	0.86	-1.2
7,411	-		Atu3010	0.87	-0.2
7,411	-		Atu3010	0.87	+0.4
7,411	-		Atu3010	0.87	+0.1
7,429	-		Atu3010	0.89	-0.3
7,515	+				+1.1
7,588	-		Atu3011	0.18	+0.1
7,678	-		Atu3011	0.43	-0.2
7,678	-		Atu3011	0.43	-0.3
7,758	-		Atu3011	0.66	+1.1
7,760	-		Atu3011	0.66	-0.6
7,945	-				-1.3
7,969	-				+0.0
7,993	+				-0.3
7,993	+				-0.5
8,001	-				+1.1
8,001	-				-0.4
8,001	-				-0.9
8,046	-				-0.3
8,046	-				-0.9
8,055	+				-1.1
8,069	+				+0.1
8,077	-				-0.8
8,161	+				-0.3
8,251	-		Atu3012	0.23	-0.4
8,268	+		Atu3012	0.25	-1.2
8,465	-		Atu3012	0.54	-1.0