Strain Fitness in Agrobacterium fabrum C58 around Atu2626
Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenoxyacetic 5 mM |
---|---|---|---|---|---|
remove | |||||
2,609,387 | + | -0.2 | |||
2,609,460 | + | -1.1 | |||
2,609,460 | + | -0.5 | |||
2,609,468 | - | +0.3 | |||
2,609,470 | + | +0.2 | |||
2,609,550 | + | Atu2626 | 0.23 | +0.3 | |
2,609,627 | - | Atu2626 | 0.43 | +1.2 | |
2,609,627 | - | Atu2626 | 0.43 | -2.5 | |
2,609,652 | - | Atu2626 | 0.49 | +0.1 | |
2,609,728 | + | Atu2626 | 0.69 | +1.5 | |
2,609,792 | - | Atu2626 | 0.85 | -0.3 | |
2,609,892 | + | +0.4 | |||
2,609,892 | + | +0.1 | |||
2,609,892 | + | +0.1 | |||
2,609,892 | + | +0.3 |
Or see this region's nucleotide sequence