Strain Fitness in Agrobacterium fabrum C58 around Atu2479

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,445,573	+		Atu2477	0.35	-0.6
2,445,635	-		Atu2477	0.47	-0.3
2,445,651	-		Atu2477	0.51	-0.7
2,445,678	+		Atu2477	0.56	-0.3
2,445,678	+		Atu2477	0.56	+0.3
2,445,686	-		Atu2477	0.58	+0.2
2,445,801	-		Atu2477	0.81	+1.0
2,445,912	+				-0.1
2,445,920	-				-0.3
2,445,958	+				-0.8
2,445,958	+				+0.5
2,445,993	+		Atu2478	0.13	+0.2
2,446,001	-		Atu2478	0.16	+0.4
2,446,008	+		Atu2478	0.19	+0.4
2,446,035	+		Atu2478	0.30	+0.0
2,446,156	-		Atu2478	0.78	-0.4
2,446,336	-				+0.1
2,446,383	+				+0.1
2,446,402	-				+0.2
2,446,410	+				+0.1
2,446,517	+				-0.4
2,446,552	-				-0.0
2,446,552	-				-0.6
2,446,603	+		Atu2479	0.49	-0.5
2,446,603	+		Atu2479	0.49	-0.3
2,446,603	+		Atu2479	0.49	-1.0
2,446,617	+		Atu2479	0.68	+1.5
2,446,682	-				-0.2
2,446,694	-				+1.0
2,446,707	+				-0.2
2,446,800	-		Atu2480	0.10	+0.8
2,446,909	+		Atu2480	0.22	+0.2
2,446,971	+		Atu2480	0.29	+0.4
2,446,974	-		Atu2480	0.29	+0.1
2,446,976	+		Atu2480	0.30	+0.0
2,446,984	-		Atu2480	0.31	-0.0
2,446,987	+		Atu2480	0.31	+0.3
2,447,031	-		Atu2480	0.36	-0.3
2,447,037	+		Atu2480	0.36	-1.2
2,447,115	+		Atu2480	0.45	-0.4
2,447,165	+		Atu2480	0.51	+0.1
2,447,172	+		Atu2480	0.51	-1.5
2,447,177	+		Atu2480	0.52	+0.1
2,447,180	-		Atu2480	0.52	+0.3
2,447,190	-		Atu2480	0.53	-0.5
2,447,256	-		Atu2480	0.61	-0.2
2,447,286	-		Atu2480	0.64	+0.1
2,447,467	-		Atu2480	0.84	+0.8
2,447,467	-		Atu2480	0.84	+0.2
2,447,512	-		Atu2480	0.89	-0.5
2,447,528	+				+0.2
2,447,592	+				+0.1
2,447,597	+				-0.0
2,447,600	-				-0.2
2,447,605	-				-0.3