Strain Fitness in Agrobacterium fabrum C58 around Atu2368

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,341,071	-		Atu2366	0.46	-0.2
2,341,086	-		Atu2366	0.48	-0.2
2,341,163	-		Atu2366	0.58	+0.7
2,341,243	+		Atu2366	0.68	+0.3
2,341,243	+		Atu2366	0.68	-0.2
2,341,243	+		Atu2366	0.68	+0.1
2,341,257	+		Atu2366	0.70	-0.2
2,341,265	-		Atu2366	0.71	-0.0
2,341,340	-		Atu2366	0.81	+0.1
2,341,421	+				-0.3
2,341,454	-				-0.1
2,341,485	+				-0.5
2,341,488	+				-0.3
2,341,488	+				+0.4
2,341,551	+				-0.3
2,341,665	-				-0.3
2,341,715	+				+1.4
2,341,737	-		Atu2367	0.15	-0.1
2,341,777	-		Atu2367	0.28	+0.0
2,341,945	-		Atu2367	0.84	-1.0
2,342,112	-		Atu2368	0.40	-2.0
2,342,127	-		Atu2368	0.48	-0.7
2,342,191	-				+0.2
2,342,233	-				+0.4
2,342,233	-				-0.0
2,342,251	+				+1.0
2,342,254	-				+0.1
2,342,272	-				-0.5
2,342,290	+				-0.9
2,342,298	-		Atu2369	0.11	+1.1
2,342,372	+		Atu2369	0.17	-0.1
2,342,372	+		Atu2369	0.17	-0.2
2,342,404	+		Atu2369	0.20	-0.2
2,342,477	+		Atu2369	0.26	+0.1
2,342,537	-		Atu2369	0.31	+1.1
2,342,537	-		Atu2369	0.31	-1.3
2,342,537	-		Atu2369	0.31	+0.8
2,342,537	-		Atu2369	0.31	-0.3
2,342,604	+		Atu2369	0.37	-0.6
2,342,727	+		Atu2369	0.48	-0.1
2,342,791	-		Atu2369	0.54	+0.2
2,342,795	+		Atu2369	0.54	+0.1
2,342,795	+		Atu2369	0.54	-0.0
2,342,795	+		Atu2369	0.54	+0.1
2,342,803	-		Atu2369	0.55	+0.1
2,342,826	+		Atu2369	0.57	-0.1
2,342,834	-		Atu2369	0.57	-1.1
2,342,834	-		Atu2369	0.57	+0.3
2,342,834	-		Atu2369	0.57	-0.4
2,342,834	-		Atu2369	0.57	+0.5
2,343,051	+		Atu2369	0.76	+0.0
2,343,080	+		Atu2369	0.79	+0.1
2,343,096	-		Atu2369	0.80	+0.1
2,343,097	+		Atu2369	0.80	+0.7
2,343,105	-		Atu2369	0.81	+0.0
2,343,164	+		Atu2369	0.86	-0.1
2,343,178	+		Atu2369	0.87	-0.2