Strain Fitness in Agrobacterium fabrum C58 around Atu2052

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
2,008,475	-				-1.5
2,008,488	-				+1.1
2,008,526	+				+0.4
2,008,573	-				+0.5
2,008,578	-				-0.1
2,008,822	+		Atu2051	0.70	-0.2
2,008,851	+		Atu2051	0.84	-0.2
2,009,013	+				+0.1
2,009,028	+				+0.3
2,009,209	+				+0.0
2,009,232	+				-0.4
2,009,238	+				+0.1
2,009,283	+				-0.2
2,009,313	+				-0.1
2,009,348	-				-0.9
2,010,045	-		Atu2052	0.18	-0.6
2,010,066	+		Atu2052	0.19	-1.7
2,010,164	-		Atu2052	0.21	-0.5
2,010,229	+		Atu2052	0.23	-0.9
2,010,488	-		Atu2052	0.30	+0.4
2,010,488	-		Atu2052	0.30	+0.4
2,010,825	+		Atu2052	0.39	+0.4
2,010,970	-		Atu2052	0.43	-2.3
2,011,056	+		Atu2052	0.45	+0.5
2,011,064	-		Atu2052	0.46	-0.9
2,011,421	+		Atu2052	0.55	+0.1
2,011,421	+		Atu2052	0.55	-0.4
2,011,461	+		Atu2052	0.56	+0.3
2,011,800	-		Atu2052	0.65	-0.5
2,012,062	-		Atu2052	0.73	-0.3
2,012,202	+		Atu2052	0.76	+1.8
2,012,210	-		Atu2052	0.77	-0.6
2,012,277	-		Atu2052	0.78	-0.4
2,012,551	-		Atu2052	0.86	-1.0
2,012,651	-		Atu2052	0.88	-1.2
2,013,044	-				+0.4
2,013,086	+				-1.5
2,013,086	+				-0.2
2,013,217	-				-0.2
2,013,293	+				+0.3
2,013,301	-				-0.1
2,013,480	-		Atu2053	0.22	+0.2
2,013,731	+		Atu2053	0.40	+0.1
2,013,750	+		Atu2053	0.41	+0.5
2,013,758	-		Atu2053	0.42	-0.1
2,013,758	-		Atu2053	0.42	-0.0
2,013,788	-		Atu2053	0.44	+0.4
2,013,840	+		Atu2053	0.47	+0.5
2,013,876	+		Atu2053	0.50	-0.4
2,013,933	+		Atu2053	0.54	-0.9
2,013,941	-		Atu2053	0.54	+0.8
2,014,018	+		Atu2053	0.60	+0.1
2,014,018	+		Atu2053	0.60	-0.0
2,014,041	-		Atu2053	0.62	-0.4