Strain Fitness in Agrobacterium fabrum C58 around Atu1619

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,604,279	+				-0.4
1,604,287	-				+0.2
1,604,287	-				+0.8
1,604,402	-		Atu1619	0.18	-0.5
1,604,486	-		Atu1619	0.36	-0.3
1,604,491	-		Atu1619	0.37	-0.5
1,605,045	-		Atu1620	0.18	+0.1
1,605,045	-		Atu1620	0.18	+1.4
1,605,060	-		Atu1620	0.20	+0.2
1,605,087	-		Atu1620	0.24	-0.3
1,605,105	+		Atu1620	0.26	-0.6
1,605,113	-		Atu1620	0.27	-0.4
1,605,145	-		Atu1620	0.31	+0.0
1,605,145	-		Atu1620	0.31	-0.4
1,605,145	-		Atu1620	0.31	+1.2
1,605,156	+		Atu1620	0.33	-0.9
1,605,175	-		Atu1620	0.35	-0.3
1,605,186	+		Atu1620	0.37	+0.4
1,605,194	-		Atu1620	0.38	-0.3
1,605,214	+		Atu1620	0.40	-0.7
1,605,274	-		Atu1620	0.48	+0.3
1,605,278	+		Atu1620	0.49	-0.4
1,605,304	-		Atu1620	0.52	-0.9
1,605,309	-		Atu1620	0.53	-0.7
1,605,357	-		Atu1620	0.59	-0.2
1,605,357	-		Atu1620	0.59	-0.0
1,605,459	-		Atu1620	0.72	-0.3
1,605,485	+		Atu1620	0.75	-0.9
1,605,530	-		Atu1620	0.81	-0.9
1,605,532	-		Atu1620	0.81	-0.7
1,605,538	+		Atu1620	0.82	-1.9
1,605,550	+		Atu1620	0.84	+1.3
1,605,591	-		Atu1620	0.89	+0.2
1,605,603	-				-0.3
1,605,603	-				+0.1
1,605,603	-				-1.0
1,605,603	-				-0.3
1,605,603	-				-0.3
1,605,603	-				-0.5
1,605,603	-				-0.9
1,605,603	-				-0.5
1,605,614	+				-0.6
1,605,633	-				-0.7
1,605,681	+				+0.4
1,605,717	+				-0.5
1,605,726	-				-0.1
1,605,748	-				-1.0