Strain Fitness in Agrobacterium fabrum C58 around Atu1489

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,478,959	+				+0.2
1,478,959	+				-0.5
1,478,980	+		Atu1489	0.11	-0.4
1,478,987	+		Atu1489	0.12	+0.2
1,479,020	-		Atu1489	0.17	+0.2
1,479,103	+		Atu1489	0.29	-0.2
1,479,113	+		Atu1489	0.31	+0.2
1,479,156	+		Atu1489	0.37	+0.2
1,479,177	-		Atu1489	0.40	+0.1
1,479,185	-		Atu1489	0.41	-0.1
1,479,214	+		Atu1489	0.45	+0.6
1,479,214	+		Atu1489	0.45	-0.8
1,479,222	-		Atu1489	0.47	-0.5
1,479,222	-		Atu1489	0.47	-0.0
1,479,254	-		Atu1489	0.51	+0.4
1,479,313	+		Atu1489	0.60	-0.4
1,479,313	+		Atu1489	0.60	-0.2
1,479,326	-		Atu1489	0.62	-0.4
1,479,967	-		Atu1490	0.86	-0.1
1,480,020	+				+0.5
1,480,072	+				+0.5
1,480,080	-				+0.6
1,480,081	-				-1.6
1,480,108	-				-0.6
1,480,110	-				+0.8
1,480,268	-		Atu1491	0.23	-0.3
1,480,281	+		Atu1491	0.24	+0.2
1,480,328	-		Atu1491	0.28	-0.1
1,480,351	-		Atu1491	0.30	+0.8
1,480,371	-		Atu1491	0.32	+0.0
1,480,528	+		Atu1491	0.47	-0.1
1,480,536	-		Atu1491	0.48	+0.3