Strain Fitness in Agrobacterium fabrum C58 around Atu1449

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,444,535	-				-0.6
1,444,569	-				-0.6
1,444,587	+				+0.4
1,444,587	+				+0.2
1,444,587	+				-0.4
1,444,603	-				-0.1
1,444,628	+				-0.6
1,444,876	-		Atu1449	0.23	-0.8
1,444,893	+		Atu1449	0.24	-0.0
1,445,044	+		Atu1449	0.35	-0.4
1,445,151	+		Atu1449	0.43	-0.8
1,445,399	-		Atu1449	0.61	-0.4
1,445,675	-		Atu1449	0.81	+0.4
1,445,690	-		Atu1449	0.82	-0.5
1,445,699	-		Atu1449	0.82	-0.8
1,445,701	+		Atu1449	0.83	+1.2
1,445,817	+				+0.8
1,446,382	-				+0.1
1,446,596	-				+0.0
1,446,645	+				+0.4
1,446,764	+		Atu1451	0.14	+0.1
1,446,767	-		Atu1451	0.15	-0.2
1,446,817	-		Atu1451	0.18	-0.0
1,446,855	-		Atu1451	0.21	-0.0
1,446,884	+		Atu1451	0.23	+0.1
1,446,891	+		Atu1451	0.24	+0.8
1,446,891	+		Atu1451	0.24	+0.4
1,446,915	-		Atu1451	0.26	+0.4