Strain Fitness in Agrobacterium fabrum C58 around Atu1087

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,077,708	-		Atu1086	0.40	-2.4
1,077,715	-		Atu1086	0.40	-1.5
1,077,753	-		Atu1086	0.42	+0.3
1,077,765	+		Atu1086	0.43	-0.3
1,077,765	-		Atu1086	0.43	-2.6
1,077,791	+		Atu1086	0.45	-1.9
1,077,892	-		Atu1086	0.51	-1.4
1,078,015	-		Atu1086	0.59	-2.4
1,078,024	-		Atu1086	0.59	-3.5
1,078,174	-		Atu1086	0.68	-3.0
1,078,213	+		Atu1086	0.71	-1.8
1,078,213	+		Atu1086	0.71	-2.1
1,078,237	+		Atu1086	0.72	-2.5
1,078,244	+		Atu1086	0.73	-2.7
1,078,245	-		Atu1086	0.73	-2.0
1,078,347	+		Atu1086	0.79	-2.5
1,078,360	-		Atu1086	0.80	-2.8
1,078,361	-		Atu1086	0.80	-2.2
1,078,363	-		Atu1086	0.80	-3.5
1,078,451	-		Atu1086	0.85	-2.7
1,078,485	+		Atu1086	0.88	-1.0
1,078,497	+		Atu1086	0.88	-0.7
1,078,543	-				-2.8
1,078,543	-				-2.7
1,078,571	+				-3.6
1,078,577	-				-1.7
1,078,618	+				+0.0
1,078,626	-				+0.6
1,078,628	+				-0.3
1,078,680	-				-1.1
1,078,764	+				-2.5
1,078,772	-				-2.4
1,078,845	+		Atu1087	0.13	-3.5
1,078,845	+		Atu1087	0.13	-1.8
1,078,845	+		Atu1087	0.13	-1.0
1,078,944	-		Atu1087	0.22	-2.3
1,079,013	-		Atu1087	0.29	-1.4
1,079,080	-		Atu1087	0.35	-1.1
1,079,080	-		Atu1087	0.35	-3.8
1,079,083	-		Atu1087	0.35	-2.1
1,079,092	-		Atu1087	0.36	-1.7
1,079,100	+		Atu1087	0.37	-1.3
1,079,115	+		Atu1087	0.38	-1.3
1,079,118	-		Atu1087	0.39	-2.8
1,079,136	-		Atu1087	0.40	-2.7
1,079,140	-		Atu1087	0.41	-3.8
1,079,448	+		Atu1087	0.69	-3.7
1,079,546	-		Atu1087	0.79	-1.6
1,079,553	+		Atu1087	0.79	-1.7
1,079,553	+		Atu1087	0.79	-0.7
1,079,566	+		Atu1087	0.81	-1.5
1,079,644	+		Atu1087	0.88	-1.0
1,079,695	+				-3.4
1,079,713	-				-1.0
1,079,747	+				-0.3
1,079,781	+				-0.3
1,079,789	-				-0.5
1,079,789	-				+0.4
1,079,795	+				+0.0
1,079,911	-				+0.1
1,079,935	+				+0.3
1,079,935	+				-0.3
1,079,943	-				+1.3
1,079,945	+				-0.5
1,079,953	-				-0.0
1,079,955	+				-0.2
1,079,955	+				-0.6