Strain Fitness in Agrobacterium fabrum C58 around Atu1041

Experiment: Phenoxyacetic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenoxyacetic 5 mM
1,031,974	+		Atu1040	0.41	+0.2
1,032,059	-		Atu1040	0.48	+0.8
1,032,198	+		Atu1040	0.60	-0.7
1,032,198	+		Atu1040	0.60	+0.4
1,032,399	-		Atu1040	0.76	-0.5
1,032,408	+		Atu1040	0.77	+0.7
1,032,510	-		Atu1040	0.85	-0.1
1,032,510	-		Atu1040	0.85	+0.8
1,032,549	+		Atu1040	0.88	+0.4
1,032,603	-				-0.4
1,032,742	+				+0.7
1,032,887	+				+0.2
1,032,947	-		Atu1041	0.13	-1.0
1,033,031	-		Atu1041	0.25	+0.1
1,033,040	-		Atu1041	0.26	-0.4
1,033,203	-		Atu1041	0.48	+0.4
1,033,239	-		Atu1041	0.53	+0.2
1,033,249	-		Atu1041	0.55	+2.5
1,033,337	+		Atu1041	0.67	+2.7
1,033,345	-		Atu1041	0.68	+0.4
1,033,427	+		Atu1041	0.79	+1.7
1,033,427	+		Atu1041	0.79	-0.1
1,033,771	+				-0.0
1,033,994	-		Atu1042	0.24	-0.0
1,034,017	+		Atu1042	0.27	-0.1
1,034,118	+		Atu1042	0.39	+0.1
1,034,226	-		Atu1042	0.51	+0.7
1,034,226	-		Atu1042	0.51	-0.2
1,034,226	-		Atu1042	0.51	-0.3
1,034,226	-		Atu1042	0.51	-0.1
1,034,319	-		Atu1042	0.63	-0.1
1,034,389	-		Atu1042	0.71	-0.6
1,034,399	-		Atu1042	0.72	-0.4