Strain Fitness in Agrobacterium fabrum C58 around Atu0723
Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenoxyacetic 5 mM |
---|---|---|---|---|---|
remove | |||||
721,733 | - | -0.5 | |||
721,842 | - | -0.3 | |||
721,855 | - | -0.3 | |||
721,855 | - | +0.3 | |||
721,855 | - | +0.2 | |||
721,939 | - | +0.2 | |||
722,107 | + | -0.5 | |||
722,124 | - | -0.7 | |||
722,173 | - | -0.5 | |||
722,253 | + | Atu0722 | 0.15 | -0.6 | |
722,396 | - | Atu0722 | 0.43 | -0.1 | |
722,424 | + | Atu0722 | 0.48 | +0.3 | |
722,539 | - | Atu0722 | 0.70 | -0.0 | |
722,616 | - | Atu0722 | 0.85 | +0.3 | |
722,616 | - | Atu0722 | 0.85 | +0.4 | |
722,666 | + | +0.6 | |||
722,666 | + | -0.2 | |||
722,667 | + | +0.0 | |||
722,674 | - | -0.6 | |||
722,674 | - | -0.5 | |||
723,084 | - | Atu0723 | 0.26 | +0.3 | |
723,122 | - | Atu0723 | 0.29 | -0.6 | |
723,369 | - | Atu0723 | 0.46 | -2.1 | |
723,412 | + | Atu0723 | 0.49 | -0.6 | |
723,527 | + | Atu0723 | 0.57 | +0.9 | |
723,734 | + | Atu0723 | 0.72 | +0.3 |
Or see this region's nucleotide sequence