Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0689 and Atu0690 overlap by 20 nucleotides Atu0690 and Atu0691 are separated by 86 nucleotides
Atu0689: Atu0689 - ribosomal large subunit pseudouridine synthase B, at 685,132 to 687,141
Atu0689
Atu0690: Atu0690 - hypothetical protein, at 687,122 to 687,679
Atu0690
Atu0691: Atu0691 - hypothetical protein, at 687,766 to 688,692
Atu0691
Atu8111: Atu8111 - tRNA-Arg, at 688,648 to 688,961
Atu8111
Position (kb) 687
688 Strain fitness (log2 ratio) -2
-1
0
1
2 at 686.127 kb on - strand, within Atu0689 at 686.156 kb on + strand, within Atu0689 at 686.246 kb on - strand, within Atu0689 at 686.433 kb on + strand, within Atu0689 at 686.441 kb on - strand, within Atu0689 at 686.445 kb on + strand, within Atu0689 at 686.453 kb on - strand, within Atu0689 at 686.477 kb on - strand, within Atu0689 at 686.636 kb on + strand, within Atu0689 at 686.689 kb on - strand, within Atu0689 at 686.786 kb on - strand, within Atu0689 at 686.843 kb on + strand, within Atu0689 at 686.917 kb on - strand, within Atu0689 at 686.931 kb on + strand, within Atu0689 at 686.939 kb on - strand, within Atu0689 at 686.939 kb on - strand, within Atu0689 at 687.107 kb on + strand at 687.150 kb on + strand at 687.158 kb on - strand at 687.368 kb on - strand, within Atu0690 at 687.498 kb on + strand, within Atu0690 at 687.600 kb on + strand, within Atu0690 at 687.604 kb on - strand, within Atu0690 at 687.674 kb on - strand at 687.756 kb on + strand at 687.854 kb on + strand at 687.943 kb on + strand, within Atu0691 at 687.951 kb on - strand, within Atu0691 at 687.979 kb on - strand, within Atu0691 at 687.984 kb on + strand, within Atu0691 at 688.104 kb on + strand, within Atu0691 at 688.128 kb on + strand, within Atu0691 at 688.133 kb on + strand, within Atu0691 at 688.136 kb on - strand, within Atu0691 at 688.236 kb on + strand, within Atu0691 at 688.256 kb on - strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.305 kb on + strand, within Atu0691 at 688.313 kb on - strand, within Atu0691 at 688.313 kb on - strand, within Atu0691 at 688.313 kb on - strand, within Atu0691 at 688.470 kb on + strand, within Atu0691 at 688.473 kb on - strand, within Atu0691 at 688.562 kb on - strand, within Atu0691 at 688.587 kb on + strand, within Atu0691 at 688.646 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenoxyacetic 5 mM remove 686,127 - Atu0689 0.50 -0.3 686,156 + Atu0689 0.51 +0.1 686,246 - Atu0689 0.55 -0.7 686,433 + Atu0689 0.65 -0.4 686,441 - Atu0689 0.65 -1.4 686,445 + Atu0689 0.65 -0.4 686,453 - Atu0689 0.66 +0.4 686,477 - Atu0689 0.67 -1.0 686,636 + Atu0689 0.75 -0.1 686,689 - Atu0689 0.77 -0.6 686,786 - Atu0689 0.82 -0.3 686,843 + Atu0689 0.85 +0.4 686,917 - Atu0689 0.89 -0.1 686,931 + Atu0689 0.90 -0.6 686,939 - Atu0689 0.90 -0.1 686,939 - Atu0689 0.90 -0.3 687,107 + -1.9 687,150 + +0.3 687,158 - +0.4 687,368 - Atu0690 0.44 +2.5 687,498 + Atu0690 0.67 +0.9 687,600 + Atu0690 0.86 -0.5 687,604 - Atu0690 0.86 -0.6 687,674 - +0.1 687,756 + -1.9 687,854 + -0.4 687,943 + Atu0691 0.19 +0.3 687,951 - Atu0691 0.20 -0.5 687,979 - Atu0691 0.23 -1.2 687,984 + Atu0691 0.24 +0.0 688,104 + Atu0691 0.36 -0.2 688,128 + Atu0691 0.39 +0.6 688,133 + Atu0691 0.40 -0.0 688,136 - Atu0691 0.40 +0.7 688,236 + Atu0691 0.51 +0.6 688,256 - Atu0691 0.53 +0.2 688,305 + Atu0691 0.58 -0.1 688,305 + Atu0691 0.58 +0.3 688,305 + Atu0691 0.58 +0.7 688,305 + Atu0691 0.58 +0.0 688,305 + Atu0691 0.58 +0.1 688,305 + Atu0691 0.58 +0.2 688,305 + Atu0691 0.58 -0.4 688,313 - Atu0691 0.59 -0.3 688,313 - Atu0691 0.59 +0.0 688,313 - Atu0691 0.59 +0.2 688,470 + Atu0691 0.76 +0.1 688,473 - Atu0691 0.76 +1.5 688,562 - Atu0691 0.86 +0.2 688,587 + Atu0691 0.89 +0.2 688,646 + -0.9
Or see this region's nucleotide sequence