Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0550 and Atu0551 overlap by 4 nucleotides Atu0551 and Atu0552 are separated by 20 nucleotides Atu0552 and Atu0553 are separated by 18 nucleotides
Atu0550: Atu0550 - flagellar P-ring protein precursor, at 538,290 to 539,411
Atu0550
Atu0551: Atu0551 - flagellar protein FLGA precursor, at 539,408 to 539,896
Atu0551
Atu0552: Atu0552 - flagellar basal-body rod protein, at 539,917 to 540,705
Atu0552
Atu0553: Atu0553 - flagellar hook-basal body complex protein, at 540,724 to 541,062
Atu0553
Position (kb) 539
540 Strain fitness (log2 ratio) -1
0
1 at 538.430 kb on + strand, within Atu0550 at 538.506 kb on - strand, within Atu0550 at 538.525 kb on + strand, within Atu0550 at 538.532 kb on + strand, within Atu0550 at 538.555 kb on - strand, within Atu0550 at 538.562 kb on - strand, within Atu0550 at 538.565 kb on + strand, within Atu0550 at 538.598 kb on - strand, within Atu0550 at 538.633 kb on + strand, within Atu0550 at 538.685 kb on + strand, within Atu0550 at 538.685 kb on + strand, within Atu0550 at 538.693 kb on - strand, within Atu0550 at 538.770 kb on + strand, within Atu0550 at 538.771 kb on - strand, within Atu0550 at 538.917 kb on - strand, within Atu0550 at 538.946 kb on - strand, within Atu0550 at 538.984 kb on + strand, within Atu0550 at 538.984 kb on + strand, within Atu0550 at 538.992 kb on - strand, within Atu0550 at 538.992 kb on - strand, within Atu0550 at 539.017 kb on + strand, within Atu0550 at 539.025 kb on - strand, within Atu0550 at 539.075 kb on + strand, within Atu0550 at 539.076 kb on - strand, within Atu0550 at 539.087 kb on + strand, within Atu0550 at 539.095 kb on - strand, within Atu0550 at 539.146 kb on + strand, within Atu0550 at 539.146 kb on + strand, within Atu0550 at 539.154 kb on - strand, within Atu0550 at 539.154 kb on - strand, within Atu0550 at 539.197 kb on + strand, within Atu0550 at 539.205 kb on - strand, within Atu0550 at 539.207 kb on - strand, within Atu0550 at 539.255 kb on - strand, within Atu0550 at 539.262 kb on - strand, within Atu0550 at 539.329 kb on + strand at 539.337 kb on - strand at 539.361 kb on + strand at 539.366 kb on + strand at 539.366 kb on + strand at 539.384 kb on - strand at 539.430 kb on + strand at 539.438 kb on + strand at 539.446 kb on - strand at 539.480 kb on + strand, within Atu0551 at 539.572 kb on + strand, within Atu0551 at 539.580 kb on - strand, within Atu0551 at 539.675 kb on + strand, within Atu0551 at 539.758 kb on + strand, within Atu0551 at 539.852 kb on + strand at 539.874 kb on + strand at 539.899 kb on - strand at 539.962 kb on + strand at 540.037 kb on + strand, within Atu0552 at 540.059 kb on + strand, within Atu0552 at 540.243 kb on - strand, within Atu0552 at 540.265 kb on - strand, within Atu0552 at 540.369 kb on + strand, within Atu0552 at 540.411 kb on - strand, within Atu0552 at 540.411 kb on - strand, within Atu0552 at 540.417 kb on + strand, within Atu0552 at 540.461 kb on + strand, within Atu0552 at 540.467 kb on - strand, within Atu0552 at 540.541 kb on + strand, within Atu0552 at 540.583 kb on + strand, within Atu0552 at 540.617 kb on + strand, within Atu0552 at 540.617 kb on + strand, within Atu0552 at 540.625 kb on - strand, within Atu0552 at 540.648 kb on + strand at 540.698 kb on + strand at 540.722 kb on + strand at 540.724 kb on - strand at 540.744 kb on + strand at 540.744 kb on + strand at 540.865 kb on - strand, within Atu0553
Per-strain Table
Position Strand Gene LocusTag Fraction Phenoxyacetic 5 mM remove 538,430 + Atu0550 0.12 -0.0 538,506 - Atu0550 0.19 -0.4 538,525 + Atu0550 0.21 -0.3 538,532 + Atu0550 0.22 +0.3 538,555 - Atu0550 0.24 +0.1 538,562 - Atu0550 0.24 +0.0 538,565 + Atu0550 0.25 +0.3 538,598 - Atu0550 0.27 +0.6 538,633 + Atu0550 0.31 -0.3 538,685 + Atu0550 0.35 +0.0 538,685 + Atu0550 0.35 -0.4 538,693 - Atu0550 0.36 -0.0 538,770 + Atu0550 0.43 +0.2 538,771 - Atu0550 0.43 -0.1 538,917 - Atu0550 0.56 -0.8 538,946 - Atu0550 0.58 +0.2 538,984 + Atu0550 0.62 -0.0 538,984 + Atu0550 0.62 -0.1 538,992 - Atu0550 0.63 -0.2 538,992 - Atu0550 0.63 -0.1 539,017 + Atu0550 0.65 +0.2 539,025 - Atu0550 0.66 +0.1 539,075 + Atu0550 0.70 +0.2 539,076 - Atu0550 0.70 -0.3 539,087 + Atu0550 0.71 -0.1 539,095 - Atu0550 0.72 -0.4 539,146 + Atu0550 0.76 +0.2 539,146 + Atu0550 0.76 +0.7 539,154 - Atu0550 0.77 -0.1 539,154 - Atu0550 0.77 +0.3 539,197 + Atu0550 0.81 +0.0 539,205 - Atu0550 0.82 -0.2 539,207 - Atu0550 0.82 +0.2 539,255 - Atu0550 0.86 +0.2 539,262 - Atu0550 0.87 -0.0 539,329 + -0.0 539,337 - -0.0 539,361 + -0.1 539,366 + +0.0 539,366 + -1.5 539,384 - +0.5 539,430 + -0.1 539,438 + +0.0 539,446 - +0.1 539,480 + Atu0551 0.15 +0.3 539,572 + Atu0551 0.34 +0.7 539,580 - Atu0551 0.35 +0.1 539,675 + Atu0551 0.55 +1.0 539,758 + Atu0551 0.72 +0.9 539,852 + -0.1 539,874 + -0.1 539,899 - -0.3 539,962 + -0.0 540,037 + Atu0552 0.15 +0.2 540,059 + Atu0552 0.18 +0.2 540,243 - Atu0552 0.41 +0.2 540,265 - Atu0552 0.44 +0.8 540,369 + Atu0552 0.57 +0.6 540,411 - Atu0552 0.63 -0.7 540,411 - Atu0552 0.63 -0.1 540,417 + Atu0552 0.63 -0.3 540,461 + Atu0552 0.69 -1.1 540,467 - Atu0552 0.70 +0.1 540,541 + Atu0552 0.79 +0.4 540,583 + Atu0552 0.84 +0.4 540,617 + Atu0552 0.89 -0.4 540,617 + Atu0552 0.89 +0.6 540,625 - Atu0552 0.90 +0.2 540,648 + +0.8 540,698 + -0.4 540,722 + +0.0 540,724 - +0.8 540,744 + -0.3 540,744 + +0.6 540,865 - Atu0553 0.42 -0.0
Or see this region's nucleotide sequence