Experiment: Phenoxyacetic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0464 and Atu0465 are separated by 50 nucleotides Atu0465 and Atu0466 are separated by 2 nucleotides Atu0466 and Atu0467 are separated by 128 nucleotides Atu0467 and Atu0468 are separated by 207 nucleotides Atu0468 and Atu0469 are separated by 81 nucleotides
Atu0464: Atu0464 - hypothetical protein, at 457,559 to 457,882
Atu0464
Atu0465: Atu0465 - transcriptional regulator, at 457,933 to 458,391
Atu0465
Atu0466: Atu0466 - hypothetical protein, at 458,394 to 458,753
Atu0466
Atu0467: Atu0467 - hypothetical protein, at 458,882 to 459,028
Atu0467
Atu0468: Atu0468 - hypothetical protein, at 459,236 to 459,649
Atu0468
Atu0469: Atu0469 - hypothetical protein, at 459,731 to 460,009
Atu0469
Position (kb) 458
459
460 Strain fitness (log2 ratio) -1
0
1 at 457.928 kb on - strand at 457.928 kb on - strand at 457.940 kb on + strand at 458.738 kb on + strand at 458.775 kb on - strand at 458.982 kb on - strand, within Atu0467 at 459.011 kb on + strand, within Atu0467 at 459.012 kb on + strand, within Atu0467 at 459.018 kb on + strand at 459.026 kb on - strand at 459.026 kb on - strand at 459.156 kb on + strand at 459.156 kb on + strand at 459.156 kb on + strand at 459.156 kb on + strand at 459.156 kb on + strand at 459.164 kb on - strand at 459.164 kb on - strand at 459.164 kb on - strand at 459.175 kb on - strand at 459.185 kb on - strand at 459.185 kb on - strand at 459.185 kb on - strand at 459.193 kb on + strand at 459.201 kb on - strand at 459.201 kb on - strand at 459.203 kb on + strand at 459.203 kb on + strand at 459.226 kb on - strand at 459.238 kb on - strand at 459.270 kb on - strand at 459.296 kb on + strand, within Atu0468 at 459.296 kb on + strand, within Atu0468 at 459.296 kb on + strand, within Atu0468 at 459.296 kb on + strand, within Atu0468 at 459.304 kb on - strand, within Atu0468 at 459.304 kb on - strand, within Atu0468 at 459.304 kb on - strand, within Atu0468 at 459.311 kb on + strand, within Atu0468 at 459.311 kb on + strand, within Atu0468 at 459.357 kb on - strand, within Atu0468 at 459.417 kb on + strand, within Atu0468 at 459.469 kb on - strand, within Atu0468 at 459.484 kb on + strand, within Atu0468 at 459.566 kb on - strand, within Atu0468 at 459.616 kb on + strand at 459.617 kb on + strand at 459.620 kb on - strand at 459.623 kb on + strand at 459.625 kb on + strand at 459.641 kb on - strand at 459.651 kb on - strand at 459.651 kb on - strand at 459.666 kb on - strand at 459.666 kb on - strand at 459.706 kb on + strand at 459.706 kb on + strand at 459.706 kb on + strand at 459.706 kb on + strand at 459.711 kb on + strand at 459.714 kb on - strand at 459.719 kb on - strand at 459.739 kb on - strand at 459.787 kb on - strand, within Atu0469 at 459.787 kb on - strand, within Atu0469 at 459.792 kb on - strand, within Atu0469 at 459.792 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.812 kb on + strand, within Atu0469 at 459.852 kb on - strand, within Atu0469 at 459.868 kb on + strand, within Atu0469 at 459.889 kb on + strand, within Atu0469 at 459.983 kb on + strand at 459.991 kb on - strand at 460.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phenoxyacetic 5 mM remove 457,928 - +0.3 457,928 - +0.2 457,940 + -0.4 458,738 + -0.1 458,775 - +0.1 458,982 - Atu0467 0.68 +0.7 459,011 + Atu0467 0.88 -0.1 459,012 + Atu0467 0.88 +0.1 459,018 + -0.3 459,026 - +0.7 459,026 - -0.2 459,156 + -0.5 459,156 + -0.2 459,156 + +0.3 459,156 + +0.0 459,156 + -0.1 459,164 - +0.1 459,164 - +0.3 459,164 - +0.7 459,175 - +0.9 459,185 - +0.6 459,185 - +0.6 459,185 - -1.1 459,193 + +0.0 459,201 - -0.1 459,201 - -0.5 459,203 + +0.4 459,203 + +0.4 459,226 - +0.3 459,238 - -0.0 459,270 - +0.2 459,296 + Atu0468 0.14 -0.2 459,296 + Atu0468 0.14 +0.8 459,296 + Atu0468 0.14 +0.2 459,296 + Atu0468 0.14 +0.4 459,304 - Atu0468 0.16 +0.1 459,304 - Atu0468 0.16 -0.4 459,304 - Atu0468 0.16 +0.2 459,311 + Atu0468 0.18 +0.0 459,311 + Atu0468 0.18 -0.3 459,357 - Atu0468 0.29 +0.8 459,417 + Atu0468 0.44 +0.5 459,469 - Atu0468 0.56 -0.0 459,484 + Atu0468 0.60 -0.1 459,566 - Atu0468 0.80 -0.0 459,616 + -0.1 459,617 + -0.3 459,620 - +0.1 459,623 + +1.0 459,625 + -0.9 459,641 - -0.5 459,651 - -0.1 459,651 - +0.3 459,666 - +0.1 459,666 - +1.5 459,706 + +0.1 459,706 + +0.2 459,706 + +1.0 459,706 + -0.1 459,711 + -0.1 459,714 - -0.3 459,719 - -0.2 459,739 - +0.3 459,787 - Atu0469 0.20 -0.2 459,787 - Atu0469 0.20 +0.1 459,792 - Atu0469 0.22 -0.1 459,792 - Atu0469 0.22 +0.1 459,808 - Atu0469 0.28 +0.4 459,808 - Atu0469 0.28 -0.3 459,808 - Atu0469 0.28 +0.5 459,808 - Atu0469 0.28 +1.5 459,812 + Atu0469 0.29 +0.3 459,852 - Atu0469 0.43 -0.8 459,868 + Atu0469 0.49 +0.4 459,889 + Atu0469 0.57 +0.0 459,983 + -0.5 459,991 - -0.0 460,001 - +0.1
Or see this region's nucleotide sequence