Strain Fitness in Agrobacterium fabrum C58 around Atu8176

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
2,241,768	+		Atu2267	0.68	-0.4
2,241,825	-		Atu2267	0.77	-0.3
2,241,859	-		Atu2267	0.82	+0.0
2,241,881	-		Atu2267	0.85	-0.4
2,242,040	+		Atu2268	0.13	+0.4
2,242,084	+		Atu2268	0.22	-0.2
2,242,090	+		Atu2268	0.23	+0.1
2,242,248	-		Atu2268	0.54	-0.3
2,242,248	-		Atu2268	0.54	-0.0
2,242,268	-		Atu2268	0.58	+0.1
2,242,281	-		Atu2268	0.61	+0.1
2,242,307	+		Atu2268	0.66	+0.1
2,242,308	+		Atu2268	0.66	+0.8
2,242,316	-		Atu2268	0.67	-0.1
2,242,334	-		Atu2268	0.71	-1.1
2,242,342	+		Atu2268	0.73	-0.2
2,242,379	-		Atu2268	0.80	+0.2
2,242,408	-		Atu2268	0.85	-0.5
2,242,415	+		Atu2268	0.87	+0.6
2,242,463	+				+0.0
2,242,671	-				-0.4
2,242,927	-		Atu8176	0.85	+0.3
2,242,943	+				-0.4
2,243,118	-				-0.5
2,243,119	-				-0.0
2,243,218	-		Atu2270	0.25	+0.1
2,243,393	+		Atu2270	0.55	-0.3
2,243,676	+				+0.9
2,243,736	-				-0.5
2,243,786	+				-1.2
2,243,843	+				+0.6
2,243,843	+				+0.0
2,243,851	-				-0.2
2,243,851	-				-0.5
2,243,851	-				-0.1
2,243,935	+				-0.3
2,243,962	+		Atu2271	0.13	-1.6