Strain Fitness in Agrobacterium fabrum C58 around Atu4737

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
1,904,615	+		Atu4736	0.78	-0.2
1,904,627	+		Atu4736	0.78	-0.0
1,904,633	-		Atu4736	0.79	-0.0
1,904,757	-		Atu4736	0.85	-0.7
1,904,875	+				-0.6
1,904,895	+				-0.5
1,904,907	+				-0.1
1,904,915	-				+1.0
1,904,988	-				-0.4
1,905,016	-				+0.1
1,905,038	-				-0.6
1,905,040	+				-0.1
1,905,051	+				+0.0
1,905,058	+				-0.1
1,905,063	+				+0.2
1,905,066	-				-0.2
1,905,089	-				+0.4
1,905,101	+				+0.5
1,905,122	+				-0.5
1,905,145	-				+0.0
1,905,159	+				+0.4
1,905,178	-				-0.1
1,905,287	+		Atu4737	0.23	+0.3
1,905,428	+				+0.8
1,905,469	+				+0.2
1,905,573	-				+1.0
1,905,690	-				+0.8
1,905,795	+		Atu4738	0.26	-0.0
1,905,844	-		Atu4738	0.34	+0.5
1,905,863	-		Atu4738	0.37	-0.1
1,905,987	+		Atu4738	0.56	+0.1
1,906,054	+		Atu4738	0.67	+1.0
1,906,081	-		Atu4738	0.71	+0.4
1,906,202	+				+0.2
1,906,298	-				+0.2
1,906,321	-				+0.2
1,906,345	+				-0.4
1,906,381	+				-1.2