Strain Fitness in Agrobacterium fabrum C58 around Atu4575

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
1,721,898	+		Atu4573	0.83	+0.5
1,721,898	+		Atu4573	0.83	-0.4
1,721,906	-		Atu4573	0.84	-0.3
1,721,906	-		Atu4573	0.84	-0.1
1,721,906	-		Atu4573	0.84	+0.5
1,721,921	+		Atu4573	0.86	-0.1
1,721,941	-		Atu4573	0.88	-0.1
1,721,958	+				+0.3
1,721,958	+				+0.1
1,721,991	+				-0.2
1,721,999	-				-0.4
1,722,066	+				-0.1
1,722,111	+				+0.3
1,722,147	+				+0.0
1,722,147	+				-0.2
1,722,155	-				-0.5
1,722,244	+		Atu4574	0.20	-1.1
1,722,253	+		Atu4574	0.21	+0.1
1,722,326	-		Atu4574	0.31	+0.3
1,722,339	+		Atu4574	0.33	+0.4
1,722,455	-		Atu4574	0.48	+0.1
1,722,553	-		Atu4574	0.61	+0.1
1,722,571	+		Atu4574	0.64	-0.9
1,722,579	-		Atu4574	0.65	+0.1
1,722,590	+		Atu4574	0.66	-0.1
1,722,629	-		Atu4574	0.71	+0.1
1,722,633	-		Atu4574	0.72	+0.1
1,722,662	+		Atu4574	0.76	+1.4
1,722,667	-		Atu4574	0.76	-0.4
1,722,685	+		Atu4574	0.79	+1.6
1,722,726	+		Atu4574	0.84	-0.3
1,722,781	+				-0.2
1,722,869	+				+0.9
1,723,049	+		Atu4575	0.16	+0.5
1,723,067	-		Atu4575	0.17	+0.8
1,723,070	+		Atu4575	0.18	+0.1
1,723,073	-		Atu4575	0.18	+0.3
1,723,075	+		Atu4575	0.18	+0.1
1,723,266	-		Atu4575	0.38	+0.6
1,723,439	+		Atu4575	0.56	+0.1
1,723,511	-		Atu4575	0.63	+0.3
1,723,531	+		Atu4575	0.66	+0.1
1,723,900	+				+0.0
1,723,918	-				+0.0
1,723,930	+				+0.1
1,723,945	-				+1.1
1,724,025	+				+0.5
1,724,157	+		Atu4576	0.15	+0.1
1,724,165	+		Atu4576	0.16	+0.6
1,724,176	+		Atu4576	0.17	-0.8
1,724,269	-		Atu4576	0.25	-0.5
1,724,347	-		Atu4576	0.33	+0.2
1,724,386	-		Atu4576	0.36	+0.0
1,724,386	-		Atu4576	0.36	-0.3
1,724,391	-		Atu4576	0.37	-0.9
1,724,470	-		Atu4576	0.44	-0.3
1,724,483	+		Atu4576	0.45	+1.0
1,724,489	+		Atu4576	0.46	+0.6
1,724,499	+		Atu4576	0.47	-0.2
1,724,499	+		Atu4576	0.47	+0.1
1,724,548	+		Atu4576	0.51	-0.4
1,724,615	-		Atu4576	0.58	-0.4
1,724,651	-		Atu4576	0.61	+0.1
1,724,666	-		Atu4576	0.62	-0.1
1,724,682	+		Atu4576	0.64	-0.3
1,724,690	-		Atu4576	0.65	-0.2
1,724,690	-		Atu4576	0.65	+0.1
1,724,753	+		Atu4576	0.70	-0.2
1,724,761	-		Atu4576	0.71	+0.6
1,724,791	+		Atu4576	0.74	+0.1
1,724,799	-		Atu4576	0.75	-0.3
1,724,817	+		Atu4576	0.76	+0.6