Strain Fitness in Agrobacterium fabrum C58 around Atu4168

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
1,285,640	-				+0.0
1,285,693	+				-0.3
1,285,745	-				+0.5
1,285,852	-		Atu4167	0.17	-0.5
1,285,888	+		Atu4167	0.25	-0.2
1,285,909	-		Atu4167	0.30	-0.0
1,285,946	+		Atu4167	0.39	+0.1
1,286,001	+		Atu4167	0.51	+0.1
1,286,002	-		Atu4167	0.51	-1.6
1,286,065	+		Atu4167	0.66	-0.1
1,286,065	+		Atu4167	0.66	-0.3
1,286,130	+		Atu4167	0.81	+0.4
1,286,152	+		Atu4167	0.86	+0.4
1,286,184	+				-0.4
1,286,184	+				+0.5
1,286,186	-				+0.7
1,286,192	-				+2.3
1,286,204	+				+0.4
1,286,228	+				+0.5
1,286,283	-		Atu4168	0.14	+0.4
1,286,296	-		Atu4168	0.17	+0.0
1,286,296	-		Atu4168	0.17	+0.7
1,286,308	+		Atu4168	0.20	+0.5
1,286,563	+		Atu4168	0.77	+0.1
1,286,571	-		Atu4168	0.79	-0.2
1,286,595	-		Atu4168	0.84	+0.1
1,286,620	+		Atu4168	0.90	+0.2
1,286,620	+		Atu4168	0.90	+0.2
1,286,628	-				+0.2
1,286,628	-				+0.1
1,286,628	-				+0.2
1,286,714	-				-0.0
1,286,840	+				+0.9
1,287,474	+		Atu4169	0.58	-0.3