Strain Fitness in Agrobacterium fabrum C58 around Atu4141

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
1,258,951	-		Atu4139	0.82	+0.3
1,258,999	+				+0.1
1,259,275	-		Atu4140	0.28	-0.2
1,259,369	+		Atu4140	0.39	-0.3
1,259,395	+		Atu4140	0.42	+0.3
1,259,440	+		Atu4140	0.48	-0.2
1,259,543	+		Atu4140	0.59	-0.1
1,259,599	+		Atu4140	0.66	-1.1
1,259,603	+		Atu4140	0.66	-0.6
1,259,615	+		Atu4140	0.68	-0.1
1,259,721	+		Atu4140	0.80	+0.1
1,259,721	+		Atu4140	0.80	+0.3
1,259,756	-		Atu4140	0.84	+0.5
1,259,761	-		Atu4140	0.85	-0.3
1,259,823	-				-0.3
1,259,833	+				-0.0
1,259,877	+				-0.3
1,259,879	+				-0.0
1,259,957	+				-0.1
1,259,986	+				-0.1
1,260,036	+		Atu4141	0.20	+0.3
1,260,038	-		Atu4141	0.21	-0.2
1,260,046	+		Atu4141	0.22	+0.2
1,260,094	+		Atu4141	0.33	+0.3
1,260,148	-		Atu4141	0.46	+0.0
1,260,160	+		Atu4141	0.48	-0.0
1,260,167	+		Atu4141	0.50	+1.6
1,260,205	-		Atu4141	0.59	+0.2
1,260,308	+		Atu4141	0.82	+0.4
1,260,317	-		Atu4141	0.84	+0.2
1,260,325	-		Atu4141	0.86	-0.0
1,260,342	+		Atu4141	0.90	+0.8
1,260,350	-				-0.4
1,260,443	+				-0.7
1,260,533	+		Atu4142	0.16	-0.7
1,260,600	+		Atu4142	0.27	+0.0
1,260,632	+		Atu4142	0.33	-0.3
1,260,643	+		Atu4142	0.35	+0.3
1,260,738	+		Atu4142	0.52	-0.1
1,260,823	+		Atu4142	0.67	+0.9
1,260,915	+		Atu4142	0.84	-0.1
1,260,915	+		Atu4142	0.84	+0.2
1,260,915	+		Atu4142	0.84	-0.3
1,260,925	+		Atu4142	0.85	+1.0
1,260,925	+		Atu4142	0.85	-0.6
1,260,938	+		Atu4142	0.88	-0.0
1,260,943	+		Atu4142	0.89	-0.4
1,260,946	-		Atu4142	0.89	+0.6
1,260,998	-				-1.7
1,261,079	-		Atu4143	0.24	-0.1
1,261,110	+		Atu4143	0.38	+0.4
1,261,160	+		Atu4143	0.61	+0.0
1,261,264	-				+0.0
1,261,293	+				-0.0