Strain Fitness in Agrobacterium fabrum C58 around Atu3886

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
979,688	-				+0.3
979,778	+				-2.3
979,786	+				+0.7
980,033	-		Atu3885	0.22	-0.1
980,042	-		Atu3885	0.23	-0.2
980,169	+		Atu3885	0.40	+0.6
980,177	-		Atu3885	0.41	-0.3
980,202	+		Atu3885	0.44	-0.4
980,215	-		Atu3885	0.45	-0.7
980,334	-		Atu3885	0.61	-0.1
980,334	-		Atu3885	0.61	-0.2
980,427	+		Atu3885	0.73	+0.8
980,435	-		Atu3885	0.74	-0.3
980,437	+		Atu3885	0.74	-0.1
980,482	+		Atu3885	0.80	-0.5
980,541	+		Atu3885	0.87	+0.0
980,590	+				-1.0
980,758	-		Atu3886	0.10	+0.2
980,759	+		Atu3886	0.11	+0.5
980,799	+		Atu3886	0.15	+0.3
980,840	-		Atu3886	0.19	+0.8
980,895	-		Atu3886	0.25	+0.3
980,905	-		Atu3886	0.26	+0.0
980,910	-		Atu3886	0.27	+0.8
980,942	-		Atu3886	0.30	-0.2
980,993	-		Atu3886	0.35	+0.7
981,034	+		Atu3886	0.40	+1.0
981,051	+		Atu3886	0.42	+1.9
981,054	-		Atu3886	0.42	+0.2
981,054	-		Atu3886	0.42	+0.4
981,079	-		Atu3886	0.44	+0.3
981,079	-		Atu3886	0.44	+0.8
981,151	+		Atu3886	0.52	+0.2
981,366	-		Atu3886	0.75	-0.2
981,488	-		Atu3886	0.88	-0.1
981,504	+		Atu3886	0.90	-0.2
981,514	+				+0.7
981,544	-				-0.2
981,569	+				+0.6
981,577	-				+0.7
981,644	-				+0.1
981,770	+				-0.3
981,857	-				+0.1
981,860	+				+0.5
981,891	+				+0.4
981,904	-				-0.0
981,979	-				-0.1
982,076	-		Atu3887	0.20	-0.4
982,082	-		Atu3887	0.21	-0.2
982,099	-		Atu3887	0.24	+0.3
982,156	+		Atu3887	0.36	-0.3
982,372	+		Atu3887	0.81	+0.1
982,372	+		Atu3887	0.81	+0.5
982,457	+				-0.3
982,527	-				+0.8