Strain Fitness in Agrobacterium fabrum C58 around Atu1445

Experiment: 4-Hydroxybenzoic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 5 mM
1,437,172	+				+1.1
1,437,266	+		Atu1444	0.12	+1.1
1,437,535	+		Atu1444	0.39	+0.1
1,437,543	-		Atu1444	0.40	+0.1
1,437,681	+		Atu1444	0.53	+0.8
1,437,704	-		Atu1444	0.55	-0.0
1,437,813	+		Atu1444	0.66	+0.1
1,438,024	+		Atu1444	0.87	+0.2
1,438,029	+		Atu1444	0.87	-0.1
1,438,045	+		Atu1444	0.89	-0.1
1,438,061	+				+0.2
1,438,089	-				-0.3
1,438,095	+				-0.1
1,438,105	+				-0.1
1,438,113	-				-0.7
1,438,113	-				+1.7
1,438,176	+				+0.1
1,438,225	-				-0.1
1,438,302	+		Atu1445	0.13	-0.3
1,438,366	+		Atu1445	0.18	-0.5
1,438,366	+		Atu1445	0.18	+1.6
1,438,436	+		Atu1445	0.25	+0.0
1,438,696	+		Atu1445	0.47	+0.4
1,438,701	+		Atu1445	0.48	+0.1
1,438,790	+		Atu1445	0.55	+0.5
1,438,819	+		Atu1445	0.58	+0.2
1,439,042	+		Atu1445	0.77	+1.0
1,439,069	-		Atu1445	0.80	+0.2
1,439,133	+		Atu1445	0.85	+1.7
1,439,283	+				+0.3
1,439,347	+				-1.0
1,439,347	+				-0.4
1,439,366	+				-0.1
1,439,486	+		Atu1446	0.13	+0.4
1,439,897	-		Atu1446	0.41	-2.2
1,440,104	+		Atu1446	0.55	+0.1