Strain Fitness in Agrobacterium fabrum C58 around Atu3287

Experiment: caffeic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	caffeic 5 mM
312,906	+				+0.0
312,906	+				-1.6
312,914	-				+0.4
312,928	+				+0.7
312,957	+				+0.8
312,996	+				+0.2
313,012	+				+0.1
313,035	-				-0.6
313,060	+				+0.3
313,154	+		Atu3286	0.19	+0.1
313,255	+		Atu3286	0.32	-0.4
313,327	+		Atu3286	0.41	+0.4
313,397	-		Atu3286	0.50	-0.6
313,415	-		Atu3286	0.53	+0.2
313,487	-		Atu3286	0.62	+0.8
313,521	+		Atu3286	0.66	-0.0
313,621	-		Atu3286	0.79	+0.9
313,629	-		Atu3286	0.80	+0.1
313,677	+		Atu3286	0.86	-0.4
313,682	+		Atu3286	0.87	+0.1
313,693	+		Atu3286	0.88	+0.2
313,735	+				-0.2
313,796	+				-0.0
313,979	-		Atu3287	0.16	-0.2
314,035	-		Atu3287	0.22	+0.5
314,044	+		Atu3287	0.23	-0.4
314,103	-		Atu3287	0.30	+1.3
314,232	-		Atu3287	0.44	-0.6
314,245	+		Atu3287	0.45	+0.3
314,342	-		Atu3287	0.56	+0.2
314,481	+		Atu3287	0.72	-0.7
314,489	-		Atu3287	0.73	-1.3
314,565	-		Atu3287	0.81	+1.9
314,568	-		Atu3287	0.81	+0.1
314,622	-		Atu3287	0.87	-0.1
314,678	-				+0.7
314,678	-				-0.6
314,770	+				+0.1
314,793	-				-0.2
314,828	-		Atu3288	0.13	+0.2
314,934	-		Atu3288	0.27	-0.5
314,959	+		Atu3288	0.31	-0.2
315,244	+		Atu3288	0.69	+0.3
315,254	+		Atu3288	0.71	+0.3
315,278	+		Atu3288	0.74	-0.4
315,323	+		Atu3288	0.80	+1.0
315,344	+		Atu3288	0.83	+0.6
315,345	-		Atu3288	0.83	-0.4
315,352	-		Atu3288	0.84	+1.9
315,366	+		Atu3288	0.86	+0.9
315,467	+				-1.1
315,475	-				-0.1
315,503	-				-0.2
315,670	-		Atu3289	0.32	-1.3