Strain Fitness in Agrobacterium fabrum C58 around Atu3492

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
541,603	+		Atu3490	0.41	-0.0
541,619	+		Atu3490	0.43	-0.2
541,647	-		Atu3490	0.45	+0.1
541,715	-		Atu3490	0.52	-0.2
541,715	-		Atu3490	0.52	-1.4
541,806	+		Atu3490	0.61	+0.5
541,813	-		Atu3490	0.62	+0.1
541,814	-		Atu3490	0.62	-0.1
541,814	-		Atu3490	0.62	-0.4
541,902	-		Atu3490	0.71	+0.7
542,150	-				-0.2
542,184	+				-1.4
542,193	+				-0.8
542,193	+				+0.1
542,201	-				+0.3
542,201	-				-1.2
542,278	+		Atu3491	0.23	-0.0
542,296	-		Atu3491	0.29	+0.1
542,341	+		Atu3491	0.43	-0.5
542,384	+		Atu3491	0.56	+0.2
542,502	+				+0.5
542,533	+				+0.2
542,541	-				+0.3
542,541	-				-0.4
542,541	-				-0.1
542,541	-				+0.1
542,541	-				+0.3
542,541	-				+0.3
542,587	-				+0.1
542,660	+				-0.1
542,926	-		Atu3492	0.29	-0.2
542,985	+		Atu3492	0.33	-0.7
543,061	+		Atu3492	0.39	-0.4
543,071	+		Atu3492	0.40	-2.7
543,221	+		Atu3492	0.50	-0.2
543,622	+		Atu3492	0.79	+0.1
543,767	-				-0.5
543,817	-				-0.1
543,859	-				+0.2
543,955	+				-1.0
544,000	+				+0.4
544,010	+				+0.3
544,150	-		Atu3493	0.23	-1.3
544,193	-		Atu3493	0.28	+0.8
544,203	-		Atu3493	0.29	+0.0
544,240	+		Atu3493	0.34	-1.0
544,391	+		Atu3493	0.52	-0.1
544,583	-		Atu3493	0.75	+0.2
544,649	-		Atu3493	0.83	-0.1
544,759	+				+0.6
544,829	+				-0.5