Strain Fitness in Agrobacterium fabrum C58 around Atu1869

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
1,846,603	+				+1.2
1,846,610	+				-0.7
1,846,662	+				-1.3
1,846,795	-		Atu1868	0.25	+0.0
1,846,978	-		Atu1868	0.47	+0.6
1,846,989	+		Atu1868	0.48	+0.3
1,847,072	-		Atu1868	0.58	+0.2
1,847,133	-		Atu1868	0.65	-0.2
1,847,152	+		Atu1868	0.67	-0.5
1,847,199	+		Atu1868	0.73	-0.1
1,847,207	+		Atu1868	0.74	+1.5
1,847,207	+		Atu1868	0.74	-0.4
1,847,215	-		Atu1868	0.75	+0.1
1,847,364	+				+0.5
1,847,407	+				+0.7
1,847,445	-				+0.4
1,847,477	-				+0.8
1,847,488	-				+2.2
1,847,490	+				+0.7
1,847,490	+				+0.1
1,847,498	-				-1.2
1,847,531	-				-0.0
1,847,581	+				+0.0
1,847,668	-		Atu1869	0.25	-2.1
1,847,686	-		Atu1869	0.29	-0.3
1,847,697	+		Atu1869	0.31	-0.5
1,847,951	+		Atu1869	0.80	-0.5
1,847,969	-		Atu1869	0.83	-0.2
1,847,969	-		Atu1869	0.83	-0.3
1,848,081	+				+0.1
1,848,156	+				+0.1
1,848,190	-				+0.2
1,848,212	+				-1.1