Strain Fitness in Agrobacterium fabrum C58 around Atu4496

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
1,642,198	+		Atu4495	0.27	+1.4
1,642,267	+		Atu4495	0.37	+1.0
1,642,338	+		Atu4495	0.47	+2.0
1,642,346	-		Atu4495	0.48	-0.5
1,642,366	+		Atu4495	0.51	-0.5
1,642,456	-		Atu4495	0.64	-0.3
1,642,456	-		Atu4495	0.64	-0.0
1,642,557	+		Atu4495	0.79	+0.1
1,642,572	-		Atu4495	0.81	+0.1
1,642,574	+		Atu4495	0.81	-0.4
1,642,610	+		Atu4495	0.86	-0.1
1,642,620	+		Atu4495	0.88	-0.3
1,642,628	-		Atu4495	0.89	+0.4
1,642,628	-		Atu4495	0.89	+0.8
1,642,628	-		Atu4495	0.89	-0.6
1,642,909	+				+0.6
1,643,070	+		Atu4496	0.15	-0.0
1,643,070	+		Atu4496	0.15	+0.1
1,643,109	+		Atu4496	0.21	+0.6
1,643,117	-		Atu4496	0.22	+0.6
1,643,187	+		Atu4496	0.32	+0.2
1,643,265	+		Atu4496	0.44	+0.8
1,643,286	-		Atu4496	0.47	+0.0
1,643,576	-		Atu4496	0.88	+0.8
1,643,632	+				-0.2
1,643,674	+		Atu4497	0.13	-0.4
1,644,054	-				-0.7
1,644,298	+		Atu4498	0.31	+0.0
1,644,298	+		Atu4498	0.31	-0.4
1,644,320	-		Atu4498	0.34	+0.4
1,644,541	-		Atu4498	0.55	+0.5
1,644,569	+		Atu4498	0.57	+0.2
1,644,577	-		Atu4498	0.58	-0.8
1,644,632	-		Atu4498	0.63	-0.2
1,644,635	+		Atu4498	0.64	-0.8
1,644,649	-		Atu4498	0.65	+0.4
1,644,649	-		Atu4498	0.65	-0.2