Strain Fitness in Agrobacterium fabrum C58 around Atu3071

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
72,782	+		Atu3070	0.32	+0.1
72,841	-		Atu3070	0.37	-0.6
72,975	+		Atu3070	0.48	+0.3
72,983	-		Atu3070	0.48	+0.1
73,226	+		Atu3070	0.68	-0.0
73,239	-		Atu3070	0.69	-0.3
73,261	+		Atu3070	0.71	+0.5
73,408	+		Atu3070	0.83	-0.7
73,411	-		Atu3070	0.83	-1.2
73,423	+		Atu3070	0.84	+0.1
73,431	-		Atu3070	0.84	-0.1
73,437	-		Atu3070	0.85	+1.2
73,540	+				-0.3
73,548	-				+0.2
73,563	-				-0.5
73,570	-				+2.2
73,693	+				+0.1
73,703	+				-0.3
73,715	+				+0.2
73,879	-		Atu3071	0.31	-0.2
73,926	-		Atu3071	0.41	+1.4
73,991	-		Atu3071	0.54	+0.7
73,992	-		Atu3071	0.54	+0.1
73,998	+		Atu3071	0.56	-0.0
74,039	-		Atu3071	0.64	-0.2
74,118	-		Atu3071	0.80	+0.5
74,159	+		Atu3071	0.89	+0.3
74,257	+				+0.1
74,262	+				-0.9
74,270	-				+0.2
74,270	-				+0.9
74,340	-				-2.9
74,342	+				+0.9
74,342	-				-0.2
74,415	+				-0.5
74,504	+				+0.1
74,552	-				-0.5
74,553	+				+0.7
74,610	-				+1.6
74,616	+				-0.3
74,616	+				-0.8
74,616	+				+0.0
74,624	-				-0.1
74,624	-				-0.1
74,704	-				+0.2
74,738	-				+0.0
74,753	+				-0.7
74,787	-				+0.5
74,851	-				+0.1
75,067	-				+0.2
75,081	-				+0.7
75,141	+		Atu3072	0.11	+0.1
75,154	-		Atu3072	0.12	+0.2