Strain Fitness in Agrobacterium fabrum C58 around Atu2251

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
2,223,012	+		Atu2251	0.24	+0.5
2,223,062	+		Atu2251	0.32	+0.1
2,223,137	+		Atu2251	0.43	-0.4
2,223,209	-		Atu2251	0.55	+0.8
2,223,224	-		Atu2251	0.57	+0.1
2,223,295	-		Atu2251	0.68	+0.3
2,223,315	-		Atu2251	0.72	+0.8
2,223,336	-		Atu2251	0.75	+0.4
2,223,426	-		Atu2251	0.89	+0.6
2,223,426	-		Atu2251	0.89	+0.2
2,223,438	-				+0.1
2,223,472	+				-0.1
2,223,565	+		Atu2252	0.12	+0.4
2,223,565	+		Atu2252	0.12	-0.2
2,223,573	-		Atu2252	0.13	-0.3
2,223,573	-		Atu2252	0.13	+0.7
2,223,573	-		Atu2252	0.13	-0.2
2,223,573	-		Atu2252	0.13	+0.1
2,223,633	+		Atu2252	0.23	+1.2
2,223,725	-		Atu2252	0.37	+0.9
2,223,745	-		Atu2252	0.40	+0.0
2,223,793	+		Atu2252	0.48	+0.7
2,223,801	-		Atu2252	0.49	-0.0
2,223,803	-		Atu2252	0.50	+0.6
2,223,860	-		Atu2252	0.59	+0.1
2,223,887	+		Atu2252	0.63	+0.1
2,223,887	+		Atu2252	0.63	+0.3
2,223,895	-		Atu2252	0.64	-0.1
2,223,895	-		Atu2252	0.64	-0.2
2,223,905	-		Atu2252	0.66	-0.8
2,224,031	-		Atu2252	0.86	+0.8
2,224,046	+		Atu2252	0.88	+0.4
2,224,048	+		Atu2252	0.88	-0.5
2,224,056	-		Atu2252	0.90	-0.2
2,224,080	-				-0.1
2,224,208	+				-0.1
2,224,208	+				+0.2
2,224,208	+				+0.7
2,224,208	+				+0.2
2,224,208	+				-0.2
2,224,216	-				-1.0
2,224,216	-				+1.5
2,224,278	+				+0.0
2,224,293	+				-0.0