Strain Fitness in Agrobacterium fabrum C58 around Atu1889

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
1,867,747	+		Atu1888	0.36	+0.0
1,867,747	+		Atu1888	0.36	+0.4
1,867,857	+		Atu1888	0.44	-0.1
1,867,860	-		Atu1888	0.44	+0.3
1,867,864	+		Atu1888	0.44	-0.7
1,867,867	+		Atu1888	0.44	+0.5
1,867,955	-		Atu1888	0.50	-0.4
1,867,957	+		Atu1888	0.50	+1.1
1,868,062	-		Atu1888	0.57	+0.3
1,868,147	+		Atu1888	0.62	+0.3
1,868,164	+		Atu1888	0.64	+1.6
1,868,164	+		Atu1888	0.64	-0.1
1,868,266	+		Atu1888	0.70	+0.2
1,868,274	+		Atu1888	0.71	-0.0
1,868,305	+		Atu1888	0.73	+0.1
1,868,305	+		Atu1888	0.73	-0.0
1,868,313	-		Atu1888	0.73	-0.3
1,868,340	+		Atu1888	0.75	+0.1
1,868,375	+		Atu1888	0.77	-0.3
1,868,468	+		Atu1888	0.83	+0.2
1,868,548	-		Atu1888	0.89	+0.2
1,868,548	-		Atu1888	0.89	-0.2
1,868,657	+				-0.1
1,868,699	-				+0.0
1,868,727	+				-0.4
1,868,749	+				+0.3
1,868,766	-				-0.2
1,869,043	-		Atu1889	0.76	+0.8
1,869,050	-		Atu1889	0.78	-0.1
1,869,140	+				-0.1
1,870,016	-		Atu1890	0.84	-0.2
1,870,091	-				-1.2